Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao, 266003, China.
Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao, 266003, China; College of Life Sciences, Yantai University, Yantai, 264005, China.
Fish Shellfish Immunol. 2019 Sep;92:450-459. doi: 10.1016/j.fsi.2019.06.035. Epub 2019 Jun 14.
PIK3CA has been extensively investigated from its molecular mechanism perspective and association with its mutations in different types of cancers. However, little has been reported regarding the pathological significance of PIK3CA expression in teleost. Here, in our present study, three PIK3CA genes termed SmPIK3CAa, SmPIK3CAb and SmPIK3CA-like were firstly identified in the genome of turbot S. maximus. Although these three genes located in different chromosomes, all of them share the same five domains. Phylogenetic and synteny analysis indicated that SmPIK3CAa, SmPIK3CAb and SmPIK3CA-like were three paralogs that may originate from duplication of the same ancestral PIK3CA gene. Subcellular localization analysis confirmed the cytoplasm distribution of these three paralogs. All three SmPIK3CA were ubiquitously expressed in examined tissues in turbot, with the higher expression levels in immune-related tissues such as blood, spleen, kidney, gills and intestines. Upon Vibrio anguillarum challenge, SmPIK3CAa and SmPIK3CA-like transcripts were significantly induced in spleen, intestine and blood despite of differential expression levels and responsive time points. Additionally, individuals in resistant group showed significantly higher expression level of both two genes than in the susceptible group. Moreover, four SNPs (102, 2530, 3027 and 3060) and one haplotype (Hap2) located in exon region of SmPIK3CA-like were identified and confirmed to be associated with V. anguillarum resistance in turbot by association analysis in different populations. Taken together, these results suggested that functional differentiation occurred in three SmPIK3CA paralogs with Vibrio anguillarum resistance and SmPIK3CAa and SmPIK3CA-like probable play potential roles in innate immune response to pathogenic invasions in turbot.
PIK3CA 从分子机制的角度及其在不同类型癌症中的突变与相关性已被广泛研究。然而,关于 PIK3CA 在硬骨鱼类中的表达的病理意义却鲜有报道。在本研究中,我们首次在大菱鲆基因组中鉴定了三个 PIK3CA 基因,分别命名为 SmPIK3CAa、SmPIK3CAb 和 SmPIK3CA-like。尽管这三个基因位于不同的染色体上,但它们都具有相同的五个结构域。系统发育和基因同线性分析表明,SmPIK3CAa、SmPIK3CAb 和 SmPIK3CA-like 是三个可能起源于同一祖先 PIK3CA 基因复制的同源基因。亚细胞定位分析证实了这三个同源基因的细胞质分布。在大菱鲆的所有检测组织中,这三个 SmPIK3CA 都广泛表达,在免疫相关组织(如血液、脾脏、肾脏、鳃和肠道)中表达水平较高。在鳗弧菌攻毒后,尽管表达水平和响应时间点不同,但 SmPIK3CAa 和 SmPIK3CA-like 转录本在脾脏、肠道和血液中均显著诱导。此外,在抗性组中,这两个基因的表达水平均显著高于易感组。此外,在 SmPIK3CA-like 的外显子区域中鉴定并确定了四个 SNP(102、2530、3027 和 3060)和一个单倍型(Hap2)与大菱鲆对鳗弧菌的抗性相关。通过在不同群体中的关联分析证实了这一点。总之,这些结果表明,三个 SmPIK3CA 同源基因在抗鳗弧菌方面发生了功能分化,SmPIK3CAa 和 SmPIK3CA-like 可能在大菱鲆对病原入侵的固有免疫反应中发挥潜在作用。