Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow 117997, Russia.
Institute of Higher Nervous Activity and Neurophysiology, Moscow 117485, Russia.
Sensors (Basel). 2019 Jul 6;19(13):2982. doi: 10.3390/s19132982.
Genetically encoded fluorescent indicators typically consist of the sensitive and reporter protein domains connected with the amino acid linkers. The final performance of a particular indicator may depend on the linker length and composition as strong as it depends on the both domains nature. Here we aimed to optimize interdomain linkers in VSD-FR189-188-a recently described red fluorescent protein-based voltage indicator. We have tested 13 shortened linker versions and monitored the dynamic range, response speed and polarity of the corresponding voltage indicator variants. While the new indicators didn't show a contrast enhancement, some of them carrying very short interdomain linkers responded 25-fold faster than the parental VSD-FR189-188. Also we found the critical linker length at which fluorescence response to voltage shift changes its polarity from negative to positive slope. Our observations thus make an important contribution to the designing principles of the fluorescent protein-derived voltage indicators.
基因编码荧光指示剂通常由敏感蛋白域和报告蛋白域通过氨基酸连接子连接而成。特定指示剂的最终性能可能取决于连接子的长度和组成,其重要程度与两个蛋白域的性质相当。本研究旨在优化最近描述的基于红色荧光蛋白的电压指示剂 VSD-FR189-188-a 的域间连接子。我们测试了 13 种缩短的连接子版本,并监测了相应电压指示剂变体的动态范围、响应速度和极性。虽然新的指示剂没有表现出对比度增强,但其中一些带有非常短的域间连接子的指示剂的响应速度比亲本 VSD-FR189-188 快 25 倍。此外,我们还发现了一个关键的连接子长度,在此长度下,荧光对电压变化的响应从负斜率变为正斜率。因此,我们的观察结果为荧光蛋白衍生的电压指示剂的设计原则做出了重要贡献。