He Jinyuan, Chao Hongying, Zhou Min, Lu Xuzhang, Chen Tao, Yang Jianhe, Jiang Naike, Zhang Ri
The Affiliated Changzhou No.2 People's Hospital of Nanjing Medical University, Changzhou, Jiangsu 213003, China.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2019 Jul 10;36(7):657-661. doi: 10.3760/cma.j.issn.1003-9406.2019.07.001.
To characterize the mutational profile of patients with core-binding factor acute myeloid leukemia (CBF-AML).
A total of 81 acute myeloid leukemia patients were recruited, which included 36 cases of CBF-AML and 45 cases of cytogenetically normal acute myeloid leukemia (CN-AML) . Mutations of FLT3-ITD, FLT3-TKD, NPM1, c-KIT, NRAS, KRAS, TET2, IDH1/2, RUNX1, DNMT3A, GATA2, ASjXL1, TP53, PTPN11, JAK2V617F, SETBP1 and CEBPA genes were simultaneously detected by DNA-based PCR and Sanger sequencing.
Over all, mutations were detected in 68 patients (83.9%), with the most common ones including double CEBPA mutations (n=17), followed by NPM1 (n=15), c-KIT (n=11), NRAS (n=10), TET2 (n=9), FLT3-TKD (n=9), FLT3-ITD (n=8), IDH1 (n=7), RUNX1 (n=7), KRAS (n=7), DNMT3A (n=6), IDH2 (n=4), and GATA2 (n=4) mutations. AML1-ETO and CBFβ-MYH11 fusions were present in 21 and 15 patients, respectively. Coexistence of ≥2 mutations was more common in CN-AML comparing with CBF-AML. The mutation rate of NPM1, FLT3-ITD, DNMT3A, IDH1 and CEBPA double mutations were higher in patients with CN-AML. NRAS, c-KIT and KRAS mutations were identified more frequently in patients with CBF-AML (P<0.05). Based on the function, aberration of genes involved in DNA methylation, NPM1 proteins and transcription predominated in CN-AML, while tyrosine kinase receptor signaling and RAS pathways have predominated in CBF-AML.
The genomic landscape of CBF-AML patients has differed from that of CN-AML patients. Synergy of fusion genes with particular mutations may impact the clinical phenotype and prognosis of patients.
明确核心结合因子急性髓系白血病(CBF-AML)患者的突变谱。
共招募81例急性髓系白血病患者,其中包括36例CBF-AML患者和45例细胞遗传学正常的急性髓系白血病(CN-AML)患者。通过基于DNA的聚合酶链反应(PCR)和桑格测序法同时检测FLT3-ITD、FLT3-TKD、NPM1、c-KIT、NRAS、KRAS、TET2、IDH1/2、RUNX1、DNMT3A、GATA2、ASXL1、TP53、PTPN11、JAK2V617F、SETBP1和CEBPA基因的突变情况。
总体而言,68例患者(83.9%)检测到突变,最常见的突变包括CEBPA双突变(n = 17),其次是NPM1(n = 15)、c-KIT(n = 11)、NRAS(n = 10)、TET2(n = 9)、FLT3-TKD(n = 9)、FLT3-ITD(n = 8)、IDH1(n = 7)、RUNX1(n = 7)、KRAS(n = 7)、DNMT3A(n = 6)、IDH2(n = 4)和GATA2(n = 4)突变。分别有21例和15例患者存在AML1-ETO和CBFβ-MYH11融合基因。与CBF-AML相比,≥2种突变共存在CN-AML中更为常见。CN-AML患者中NPM1、FLT3-ITD、DNMT3A、IDH1和CEBPA双突变的发生率更高。NRAS、c-KIT和KRAS突变在CBF-AML患者中更常见(P<0.05)。从功能上看,参与DNA甲基化、NPM1蛋白和转录的基因异常在CN-AML中占主导,而酪氨酸激酶受体信号传导和RAS途径在CBF-AML中占主导。
CBF-AML患者的基因组格局与CN-AML患者不同。融合基因与特定突变的协同作用可能影响患者的临床表型和预后。