Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.
Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, MO 63110, USA.
DNA Repair (Amst). 2019 Nov;83:102720. doi: 10.1016/j.dnarep.2019.102720. Epub 2019 Sep 21.
The Exo5 family consists of bi-directional, single-stranded DNA-specific exonucleases that contain an iron-sulfur cluster as a structural motif and have multiple roles in DNA metabolism. S. cerevisiae Exo5 is essential for mitochondrial genome maintenance, while the human ortholog is important for nuclear genome stability and DNA repair. Here, we identify the Exo5 ortholog in Schizosaccharomyes pombe (spExo5). The activity of spExo5 is highly similar to that of the human enzyme. When the single-stranded DNA is coated with single-stranded DNA binding protein RPA, spExo5 become a 5'-specific exonuclease. Exo5Δ mutants are sensitive to various DNA damaging agents, particularly interstrand crosslinking agents. An epistasis analysis places exo5 in the Fanconi pathway for interstrand crosslink repair. Exo5 is in a redundant pathway with rad2, which encodes the flap endonuclease FEN1, for mitochondrial genome maintenance. Deletion of both genes lead to severe depletion of the mitochondrial genome, and defects in respiration, indicating that either spExo5 or spFEN1 is necessary for mitochondrial DNA metabolism.
Exo5 家族由双向、单链 DNA 特异性核酸外切酶组成,它们含有一个铁硫簇作为结构基序,在 DNA 代谢中具有多种作用。酿酒酵母 Exo5 对于线粒体基因组的维持是必不可少的,而人类同源物对于核基因组的稳定性和 DNA 修复很重要。在这里,我们鉴定了裂殖酵母中的 Exo5 同源物(spExo5)。spExo5 的活性与人酶高度相似。当单链 DNA 被单链 DNA 结合蛋白 RPA 包被时,spExo5 成为 5'特异性核酸外切酶。spExo5Δ 突变体对各种 DNA 损伤剂敏感,特别是交联剂。上位性分析将 exo5 置于 Fanconi 途径中用于交联修复。Exo5 与编码核酸内切酶 FEN1 的 rad2 冗余途径一起维持线粒体基因组。这两个基因的缺失都会导致线粒体基因组的严重耗竭,以及呼吸缺陷,这表明 spExo5 或 spFEN1 对于线粒体 DNA 代谢是必要的。