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RBM39 被磺胺类分子胶 E7820 招募到 DCAF15 的结构基础和动力学途径。

Structural Basis and Kinetic Pathway of RBM39 Recruitment to DCAF15 by a Sulfonamide Molecular Glue E7820.

机构信息

Peloton Therapeutics, Dallas, Texas, a Subsidiary of Merck & Co., Inc., Kenilworth, NJ 07033, USA.

Peloton Therapeutics, Dallas, Texas, a Subsidiary of Merck & Co., Inc., Kenilworth, NJ 07033, USA.

出版信息

Structure. 2019 Nov 5;27(11):1625-1633.e3. doi: 10.1016/j.str.2019.10.005.

Abstract

E7820 and indisulam are two examples of aryl sulfonamides that recruit RBM39 to Rbx-Cul4-DDA1-DDB1-DCAF15 E3 ligase complex, leading to its ubiquitination and degradation by the proteasome. To understand their mechanism of action, we performed kinetic analysis on the recruitment of RBM39 to DCAF15 and solved a crystal structure of DDA1-DDB1-DCAF15 in complex with E7820 and the RRM2 domain of RBM39. E7820 packs in a shallow pocket on the surface of DCAF15 and the resulting modified interface binds RBM39 through the α1 helix of the RRM2 domain. Our kinetic studies revealed that aryl sulfonamide and RBM39 bind to DCAF15 in a synergistic manner. The structural and kinetic studies confirm aryl sulfonamides as molecular glues in the recruitment of RBM39 and provide a framework for future efforts to utilize DCAF15 to degrade other proteins of interest.

摘要

E7820 和 indisulam 是两种芳基磺酰胺类化合物,它们能够招募 RBM39 到 Rbx-Cul4-DDA1-DDB1-DCAF15 E3 连接酶复合物中,导致其通过蛋白酶体进行泛素化和降解。为了了解它们的作用机制,我们对 RBM39 与 DCAF15 的募集进行了动力学分析,并解析了 DDA1-DDB1-DCAF15 与 E7820 和 RBM39 的 RRM2 结构域复合物的晶体结构。E7820 位于 DCAF15 表面的一个浅口袋中,由此产生的修饰界面通过 RRM2 结构域的α1 螺旋与 RBM39 结合。我们的动力学研究表明,芳基磺酰胺和 RBM39 以协同方式结合 DCAF15。结构和动力学研究证实芳基磺酰胺类化合物是招募 RBM39 的分子胶,并为利用 DCAF15 降解其他感兴趣的蛋白质提供了一个框架。

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