Faculty of Physics, Saratov National Research State University, Astrakhanskaya, 83, Saratov-410012, Russia.
Institute of Mathematical Problems of Biology-Branch of Keldysh Institute of Applied Mathematics, Russian Academy of Sciences, Professor Vitkevich St., 1, Pushchino-142290, Moscow Region, Russia.
Phys Rev E. 2019 Nov;100(5-1):052203. doi: 10.1103/PhysRevE.100.052203.
Mobile discrete breathers (MDBs) are here suggested as localized excitations underlying the trapping and transport of charged particles (electron or hole) along a DNA-like molecular wire with anchored ends such as attached to two electrodes. For illustration the Peyrard-Bishop-Dauxois-Holstein (PBDH) model is used. MDBs are excited by imposing appropriate disturbances to velocities or space positions of adjacent nucleotide pairs or lattice units of the wire. They can be directed either towards or away from the wire hence transverse to it. Numerical computer simulations show that a rather stable quasiparticle MDB + electron is possible when just a few of the nucleotide pairs near one of the fixed ends of the wire are excited. For the process to be effective, the charge, e.g., the electron, must be initially placed around the disturbed region of the molecule. Once the MDB + electron quasiparticle is formed it may be transported to quite a long distance up to ca. 60-70 nm in real space. Our findings show that such process does not demand intervention of an externally applied electric field and hence it may be considered as alternative to the polaron transport process.
这里提出的移动离散呼吸子(MDB)被认为是在具有锚定端的 DNA 样分子线(例如连接到两个电极)中,局部激发的带电粒子(电子或空穴)的捕获和传输的基础。为了说明,使用了 Peyrard-Bishop-Dauxois-Holstein(PBDH)模型。通过对相邻核苷酸对或线的晶格单元的速度或空间位置施加适当的干扰,可以激发 MDB。它们可以指向或远离线,因此与线垂直。数值计算机模拟表明,当仅在靠近线的固定端之一的几个核苷酸对附近激发时,就可以形成相当稳定的准粒子 MDB+电子。为了使该过程有效,电荷,例如电子,必须最初置于分子的受扰区域周围。一旦形成 MDB+电子准粒子,它就可以在真空中被传输到相当长的距离,可达 60-70nm 左右。我们的发现表明,该过程不需要外部施加电场的干预,因此它可以被认为是极化子输运过程的替代方案。