University of Cologne, Biocenter, Institute of Zoology, General Ecology, 50674 Cologne, Germany.
Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Diagnostic Virology, Südufer 10, D-17493 Greifswald, Insel Riems, Germany.
Eur J Protistol. 2020 Apr;73:125665. doi: 10.1016/j.ejop.2019.125665. Epub 2020 Jan 3.
Cafeteria is one of the most common and ecologically significant genera of heterotrophic nanoflagellates in marine plankton. We could isolate and cultivate 29 strains morphologically similar to Cafeteria obtained from surface waters and the deep sea all over the world's ocean. Morphological characterization obtained by high resolution microscopy revealed only small differences between the strains. Sequencing the type material of the type species C. roenbergensis (CCAP 1900/1) and molecular analyses (18S rDNA, 28S rDNA) of newly isolated strains resulted in a revision and separation of the Cafeteriaceae into two known species (C. roenbergensis, C. mylnikovii) and six new species (C. maldiviensis, C. biegae, C. loberiensis, C. chilensis, C. graefeae, C. burkhardae). Many deposited Cafeteria sequences at GenBank and most of our own sequences clustered within one clade (C. burkhardae) with a p-distance of 5% to strain CCAP 1900/1. Only C. maldiviensis clustered together with the type species C. roenbergensis. While C. burkhardae seems to have a cosmopolitan distribution, the distribution of the other species seems to be more restricted. A strain from the Angola Basin had a p-distance of 10% to Cafeteria species and clustered separately within the Anoecales requiring the erection of a new genus, Bilabrum gen. nov., with B. latius sp. nov. as type species.
浮游动物异养鞭毛虫中的 Cafeteria 是最常见且生态意义重大的属之一。我们可以从世界各地海洋的表层水和深海中分离和培养 29 株与 Cafeteria 形态相似的菌株。高分辨率显微镜获得的形态特征表明,这些菌株之间只有微小的差异。对模式种 Cafeteria roenbergensis(CCAP 1900/1)的模式标本进行测序以及对新分离菌株的分子分析(18S rDNA、28S rDNA)导致 Cafeteriaceae 被修订并分为两个已知物种(C. roenbergensis、C. mylnikovii)和六个新物种(C. maldiviensis、C. biegae、C. loberiensis、C. chilensis、C. graefeae、C. burkhardae)。许多在 GenBank 中存放的 Cafeteria 序列和我们自己的大多数序列聚类在一个分支(C. burkhardae)中,与 CCAP 1900/1 菌株的 p-distance 为 5%。只有 C. maldiviensis 与模式种 C. roenbergensis 聚类在一起。虽然 C. burkhardae 似乎具有世界性分布,但其他物种的分布似乎更为局限。来自安哥拉盆地的一株菌株与 Cafeteria 物种的 p-distance 为 10%,并在单独的 Anoecales 内聚类,需要建立一个新属,Bilabrum gen. nov.,其模式种为 B. latius sp. nov.