Byrne Alicia B, Mizumoto Shuji, Arts Peer, Yap Patrick, Feng Jinghua, Schreiber Andreas W, Babic Milena, King-Smith Sarah L, Barnett Christopher P, Moore Lynette, Sugahara Kazuyuki, Mutlu-Albayrak Hatice, Nishimura Gen, Liebelt Jan E, Yamada Shuhei, Savarirayan Ravi, Scott Hamish S
Department of Genetics and Molecular Pathology, Centre for Cancer Biology, An alliance between SA Pathology and the University of South Australia, Adelaide, South Australia, Australia.
School of Pharmacy and Medical Sciences, University of South Australia, Adelaide, South Australia, Australia.
J Med Genet. 2020 Jul;57(7):454-460. doi: 10.1136/jmedgenet-2019-106700. Epub 2020 Jan 27.
Pseudodiastrophic dysplasia (PDD) is a severe skeletal dysplasia associated with prenatal manifestation and early lethality. Clinically, PDD is classified as a 'dysplasia with multiple joint dislocations'; however, the molecular aetiology of the disorder is currently unknown.
Whole exome sequencing (WES) was performed on three patients from two unrelated families, clinically diagnosed with PDD, in order to identify the underlying genetic cause. The functional effects of the identified variants were characterised using primary cells and human cell-based overexpression assays.
WES resulted in the identification of biallelic variants in the established skeletal dysplasia genes, (family 1) and (family 2). Mutations in these genes have previously been reported to cause 'multiple joint dislocations, short stature, and craniofacial dysmorphism with or without congenital heart defects' ('JDSCD'; B3GAT3) and Desbuquois dysplasia 1 (CANT1), disorders in the same nosological group as PDD. Follow-up of the variants demonstrated significantly reduced B3GAT3/GlcAT-I expression. Downstream functional analysis revealed abolished biosynthesis of glycosaminoglycan side chains on proteoglycans. Functional evaluation of the variant showed impaired nucleotidase activity, which results in inhibition of glycosaminoglycan synthesis through accumulation of uridine diphosphate.
For the families described in this study, the PDD phenotype was caused by mutations in the known skeletal dysplasia genes and , demonstrating the advantage of genomic analyses in delineating the molecular diagnosis of skeletal dysplasias. This finding expands the phenotypic spectrum of B3GAT3-related and CANT1-related skeletal dysplasias to include PDD and highlights the significant phenotypic overlap of conditions within the proteoglycan biosynthesis pathway.
假性脊柱发育不良(PDD)是一种严重的骨骼发育不良,伴有产前表现和早期致死性。临床上,PDD被归类为“伴有多关节脱位的发育不良”;然而,该疾病的分子病因目前尚不清楚。
对来自两个无关家庭的三名临床诊断为PDD的患者进行了全外显子组测序(WES),以确定潜在的遗传原因。使用原代细胞和基于人类细胞的过表达试验对鉴定出的变异体的功能效应进行了表征。
WES导致在已确定的骨骼发育不良基因(家族1)和(家族2)中鉴定出双等位基因变异。先前已报道这些基因中的突变会导致“多关节脱位、身材矮小和有或无先天性心脏缺陷的颅面畸形”(“JDSCD”;B3GAT3)和德斯布瓦发育不良1(CANT1),这些疾病与PDD属于同一疾病分类组。对这些变异体的后续研究表明B3GAT3/GlcAT-I表达显著降低。下游功能分析显示蛋白聚糖上糖胺聚糖侧链的生物合成被消除。对该变异体的功能评估显示核苷酸酶活性受损,这通过尿苷二磷酸的积累导致糖胺聚糖合成受到抑制。
对于本研究中描述的家庭,PDD表型是由已知的骨骼发育不良基因和中的突变引起的,这证明了基因组分析在确定骨骼发育不良分子诊断方面的优势。这一发现将与B3GAT3相关和与CANT1相关的骨骼发育不良的表型谱扩展到包括PDD,并突出了蛋白聚糖生物合成途径中各病症之间显著的表型重叠。