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碘原子对人蛋白激酶CK2催化亚基结合多卤代苯并三唑的热力学贡献

Thermodynamic contribution of iodine atom to the binding of heterogeneously polyhalogenated benzotriazoles by the catalytic subunit of human protein kinase CK2.

作者信息

Marzec Ewa, Poznański Jarosław, Paprocki Daniel

机构信息

Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.

出版信息

IUBMB Life. 2020 Jun;72(6):1203-1210. doi: 10.1002/iub.2257. Epub 2020 Feb 21.

DOI:10.1002/iub.2257
PMID:32083806
Abstract

A series of novel benzotriazole derivatives containing iodine atom(s) were synthesized. The binding of these compounds to the catalytic subunit of human protein kinase CK2 was evaluated using differential scanning fluorimetry. The obtained thermodynamic data were compared with those determined previously for the brominated and chlorinated benzotriazole analogues to get a deeper insight into the thermodynamic contribution of iodine substitution to the free energy of ligand binding. We have shown that iodine atom(s) attached to the benzene ring of benzotriazole enhance(s) its binding by the target protein. This effect is the strongest when two iodine atoms are attached at positions peripheral to the triazole ring, which according to the structures deposited in protein data bank may be indicative for the formation of the halogen bond between iodine and carbonyl groups of residues located in the hinge region of the protein. Finally, quantitative structure-activity relationship analysis pointed the solute hydrophobicity as the main factor contributing to the binding affinity.

摘要

合成了一系列含碘原子的新型苯并三唑衍生物。使用差示扫描荧光法评估了这些化合物与人蛋白激酶CK2催化亚基的结合情况。将获得的热力学数据与先前测定的溴化和氯化苯并三唑类似物的数据进行比较,以更深入地了解碘取代对配体结合自由能的热力学贡献。我们已经表明,连接在苯并三唑苯环上的碘原子增强了其与靶蛋白的结合。当两个碘原子连接在三唑环外围的位置时,这种效应最强,根据蛋白质数据库中保存的结构,这可能表明在蛋白质铰链区的残基的碘与羰基之间形成了卤键。最后,定量构效关系分析指出溶质疏水性是影响结合亲和力的主要因素。

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Competition between electrostatic interactions and halogen bonding in the protein-ligand system: structural and thermodynamic studies of 5,6-dibromobenzotriazole-hCK2α complexes.静电相互作用和卤键在蛋白质-配体体系中的竞争:5,6-二溴苯并三唑-hCK2α 复合物的结构和热力学研究。
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