Flores Andrew D, Choi Hyun G, Martinez Rodrigo, Onyeabor Moses, Ayla E Zeynep, Godar Amanda, Machas Michael, Nielsen David R, Wang Xuan
Chemical Engineering, School for Engineering of Matter, Transport, and Energy, Arizona State University, Tempe, AZ, United States.
School of Life Sciences, Arizona State University, Tempe, AZ, United States.
Front Bioeng Biotechnol. 2020 May 5;8:329. doi: 10.3389/fbioe.2020.00329. eCollection 2020.
Although biological upgrading of lignocellulosic sugars represents a promising and sustainable route to bioplastics, diverse and variable feedstock compositions (e.g., glucose from the cellulose fraction and xylose from the hemicellulose fraction) present several complex challenges. Specifically, sugar mixtures are often incompletely metabolized due to carbon catabolite repression while composition variability further complicates the optimization of co-utilization rates. Benefiting from several unique features including division of labor, increased metabolic diversity, and modularity, synthetic microbial communities represent a promising platform with the potential to address persistent bioconversion challenges. In this work, two unique and catabolically orthogonal co-cultures systems were developed and used to enhance the production of D-lactate and succinate (two bioplastic monomers) from glucose-xylose mixtures (100 g L total sugars, 2:1 by mass). In both cases, glucose specialist strains were engineered by deleting (encoding the xylose-specific transcriptional activator, XylR) to disable xylose catabolism, whereas xylose specialist strains were engineered by deleting several key components involved with glucose transport and phosphorylation systems (i.e., , , , ) while also increasing xylose utilization by introducing specific mutations. Optimization of initial population ratios between complementary sugar specialists proved a key design variable for each pair of strains. In both cases, ∼91% utilization of total sugars was achieved in mineral salt media by simple batch fermentation. High product titer (88 g L D-lactate, 84 g L succinate) and maximum productivity (2.5 g L h D-lactate, 1.3 g L h succinate) and product yield (0.97 g g-total sugar for D-lactate, 0.95 g g-total sugar for succinate) were also achieved.
尽管木质纤维素糖的生物升级是生产生物塑料的一条有前景且可持续的途径,但多样且可变的原料成分(例如来自纤维素部分的葡萄糖和来自半纤维素部分的木糖)带来了几个复杂的挑战。具体而言,由于碳分解代谢物阻遏,糖混合物往往不能被完全代谢,而成分的变异性进一步使共利用速率的优化变得复杂。受益于包括分工、代谢多样性增加和模块化等几个独特特征,合成微生物群落是一个有前景的平台,有潜力解决持续存在的生物转化挑战。在这项工作中,开发了两种独特且分解代谢正交的共培养系统,并用于提高由葡萄糖 - 木糖混合物(总糖100 g/L,质量比2:1)生产D - 乳酸和琥珀酸(两种生物塑料单体)的产量。在这两种情况下,通过删除(编码木糖特异性转录激活因子XylR)来改造葡萄糖专用菌株,以禁用木糖分解代谢,而通过删除与葡萄糖转运和磷酸化系统相关的几个关键组分(即,,,)来改造木糖专用菌株,同时还通过引入特定的突变来提高木糖利用率。事实证明,互补糖专用菌株之间初始种群比例的优化是每对菌株的关键设计变量。在这两种情况下,通过简单的分批发酵在矿物盐培养基中实现了约91%的总糖利用率。还实现了高产物滴度(88 g/L D - 乳酸,84 g/L琥珀酸)、最大生产率(2.5 g/L·h D - 乳酸,1.3 g/L·h琥珀酸)和产物产率(D - 乳酸为0.97 g/g - 总糖,琥珀酸为0.95 g/g - 总糖)。