Department of Prenatal Diagnosis, Women's Hospital of Nanjing Medical University, Nanjing Maternity and Child Health Care Hospital, Nanjing, China.
School of Life Sciences, Nanjing University, Nanjing, China.
Clin Biochem. 2020 Oct;84:93-98. doi: 10.1016/j.clinbiochem.2020.06.010. Epub 2020 Jun 14.
Primary coenzyme Q10 deficiency refers to a group of diseases characterised by reduced levels of coenzyme Q10 in related tissues or cultured cells associated with the 9 genes involved in the biosynthesis of coenzyme Q10. A biallelic pathogenic variant of COQ8A gene causes the occurrence of the primary coenzyme Q10 deficiency type 4. The objective of this study was to investigate the genetic cause of muscle weakness in a proband who had a negative DMD gene test for Becker muscular dystrophy.
The DNA of the proband was sequenced using whole exome sequencing. With the help of the Human Phenotype Ontology (HPO), the range of related candidate pathogenic genes has been reduced to a certain extent based on "muscle weakness" (HP:0001324). In addition, family linkage analysis, phenotypic-genotype check and protein structure modeling were used to explore the genetic cause of the proband.
The compound heterozygous variant c.836A > C (p.Gln279Pro) and c.1228C > T (p.Arg410Ter) in the COQ8A gene was identified in the proband. According to the 2015 American College of Medical Genetics and Genomics (ACMG) standards and guidelines for the interpretation of sequence variants, the novel variant c.836A > C could be classified as "likely pathogenic" for the proband.
The p.Gln279Pro was detected in the KxGQ motif and the QKE triplet of the COQ8A protein, whose structures were crucial for the structure and function of the COQ8A protein associated with the biosynthesis of coenzyme Q10 and the proband's clinical symptoms were relatively milder than those previously reported.
原发性辅酶 Q10 缺乏症是指一组与辅酶 Q10 生物合成相关的 9 个基因相关的组织或培养细胞中辅酶 Q10 水平降低的疾病。COQ8A 基因的双等位致病性变异导致原发性辅酶 Q10 缺乏症 4 型的发生。本研究旨在探讨一位肌营养不良症阴性的 Becker 型肌营养不良症先证者肌肉无力的遗传原因。
采用全外显子组测序对先证者的 DNA 进行测序。借助人类表型本体(HPO),根据“肌肉无力”(HP:0001324),将相关候选致病性基因的范围缩小到一定程度。此外,还采用家系连锁分析、表型-基因型检查和蛋白质结构建模来探讨先证者的遗传原因。
在 COQ8A 基因中发现了复合杂合变异 c.836A>C(p.Gln279Pro)和 c.1228C>T(p.Arg410Ter)。根据 2015 年美国医学遗传学与基因组学学院(ACMG)关于序列变异解释的标准和指南,新变异 c.836A>C 可归类为先证者的“可能致病性”。
在 COQ8A 蛋白的 KxGQ 基序和 QKE 三联体中检测到 p.Gln279Pro,其结构对于与辅酶 Q10 生物合成相关的 COQ8A 蛋白的结构和功能至关重要,并且先证者的临床症状比之前报道的要轻。