Cleetus Annie, Rani Gulshan, Dharma Rao G B, Chopra Deepak
Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal By-Pass Road, Bhauri, Bhopal 462 066, Madhya Pradesh, India.
Acta Crystallogr C Struct Chem. 2020 Aug 1;76(Pt 8):786-794. doi: 10.1107/S2053229620009560. Epub 2020 Jul 23.
Methyl 4-(4-fluorophenyl)-6-methyl-2-oxo-1,2,3,4-tetrahydropyrimidine-5-carboxylate, (I), was found to exhibit solvatomorphism. The compound was prepared using a classic Biginelli reaction under mild conditions, without using catalysts and in a solvent-free environment. Single crystals of two solvatomorphs and one anhydrous form of (I) were obtained through various crystallization methods. The anhydrous form, CHFNO, was found to crystallize in the monoclinic space group C2/c. It showed one molecule in the asymmetric unit. The solvatomorph with included carbon tetrachloride, CHFNO·0.25CCl, was found to crystallize in the monoclinic space group P2/n. The asymmetric unit revealed two molecules of (I) and one disordered carbon tetrachloride solvent molecule that lies on a twofold axis. A solvatomorph including ethyl acetate, CHFNO·0.5CHO, was found to crystallize in the triclinic space group P-1 with one molecule of (I) and one solvent molecule on an inversion centre in the asymmetric unit. The solvent molecules in the solvatomorphs were found to be disordered, with a unique case of crystallographically induced disorder in (I) crystallized with ethyl acetate. Hydrogen-bonding interactions, for example, N-H...O=C, C-H...O=C, C-H...F and C-H...π, contribute to the crystal packing with the formation of a characteristic dimer through N-H...O=C interactions in all three forms. The solvatomorphs display additional interactions, such as C-F...N and C-Cl...π, which are responsible for their molecular arrangement. The thermal properties of the forms were analysed through differential scanning calorimetry (DSC), hot stage microscopy (HSM) and thermogravimetric analysis (TGA) experiments.
4-(4-氟苯基)-6-甲基-2-氧代-1,2,3,4-四氢嘧啶-5-羧酸甲酯(I)表现出溶剂同构现象。该化合物是在温和条件下通过经典的Biginelli反应制备的,不使用催化剂且在无溶剂环境中进行。通过各种结晶方法获得了(I)的两种溶剂变体和一种无水形式的单晶。无水形式的CHFNO结晶于单斜空间群C2/c中。其不对称单元中含有一个分子。含四氯化碳的溶剂变体CHFNO·0.25CCl结晶于单斜空间群P2/n中。不对称单元显示有两个(I)分子和一个位于二重轴上的无序四氯化碳溶剂分子。含乙酸乙酯的溶剂变体CHFNO·0.5CHO结晶于三斜空间群P-1中,不对称单元中有一个(I)分子和一个位于对称中心的溶剂分子。发现溶剂变体中的溶剂分子是无序的,在与乙酸乙酯结晶的(I)中存在一种独特的晶体学诱导无序情况。氢键相互作用,例如N-H...O=C、C-H...O=C、C-H...F和C-H...π,通过N-H...O=C相互作用在所有三种形式中形成特征性二聚体,有助于晶体堆积。溶剂变体还显示出额外的相互作用,如C-F...N和C-Cl...π,这对它们的分子排列起作用。通过差示扫描量热法(DSC)、热台显微镜(HSM)和热重分析(TGA)实验对这些形式的热性质进行了分析。