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柱形薄膜增强的部分血指纹进行大规模平行测序和 STR 分析。

Massively parallel sequencing and STR analysis from partial bloody fingerprints enhanced with columnar thin films.

机构信息

Forensic Science Program and Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA, 16802, USA.

Materials Research Institute and Department of Engineering Science and Mechanics, Pennsylvania State University, University Park, PA, 16802, USA.

出版信息

Forensic Sci Int Genet. 2020 Nov;49:102369. doi: 10.1016/j.fsigen.2020.102369. Epub 2020 Aug 16.

Abstract

Fingerprint enhancement often includes either physical or chemical approaches, such as fingerprint powder or cyanoacrylate fuming, to improve the quality of a fingerprint for visualization and analysis. However, these methods become more complex when fingerprints are partial bloody, and these procedures may interfere with downstream DNA analysis. Columnar thin film (CTF) deposition is a type of nanotechnology that utilizes an evaporant material to enhance a fingerprint under low-pressure conditions. Short tandem repeat (STR) analysis is the traditional method employed in crime laboratories. When DNA is of poor quality and quantity, like that often obtained from fingerprints, little to no genetic information may be obtained. Single nucleotide polymorphisms (SNPs) may be used to glean additional information when STR analysis fails. In this pilot study, 100 partial bloody fingerprints were collected from two donors and deposited on five different crime scene substrates, in which half were enhanced with CTFs and were graded for quality by an IAI-certified latent fingerprint examiner. CTF-developed fingerprints, on average, had higher grades compared to non-developed partial bloody fingerprints. STR analysis using Fusion 6C was performed to assess inhibition from the evaporant materials, in which no inhibition was observed. Sequencing of SNPs using the Precision ID Identity Panel was also employed, in which genetic information that could not be obtained from STRs was acquired with SNPs. Various sample types (i.e. pristine, low quality, and contaminated) utilized in this project demonstrated the acceptable performance of the Precision ID Identity Panel.

摘要

指纹增强通常包括物理或化学方法,例如指纹粉末或氰基丙烯酸酯熏显,以改善指纹的质量,便于可视化和分析。然而,当指纹是部分血迹时,这些方法变得更加复杂,并且这些程序可能会干扰下游的 DNA 分析。柱状薄膜(CTF)沉积是一种纳米技术,利用蒸发物质在低压条件下增强指纹。短串联重复(STR)分析是犯罪实验室中传统使用的方法。当 DNA 质量和数量较差时,例如通常从指纹中获得的 DNA,可能几乎无法获得遗传信息。当 STR 分析失败时,单核苷酸多态性(SNP)可用于获取其他信息。在这项初步研究中,从两个供体收集了 100 个部分血迹指纹,并将其沉积在五个不同的犯罪现场基质上,其中一半用 CTF 增强,并由 IAI 认证的潜伏指纹检验员对其质量进行分级。与未开发的部分血迹指纹相比,CTF 开发的指纹平均具有更高的等级。使用 Fusion 6C 进行 STR 分析以评估蒸发物质的抑制作用,未观察到抑制作用。还使用 Precision ID 身份面板对 SNPs 进行测序,获得了无法从 STR 获得的遗传信息。该项目中使用的各种样本类型(即原始、低质量和污染)证明了 Precision ID 身份面板的可接受性能。

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