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利用大规模平行测序技术鉴定 HELLP 综合征新的潜在遗传生物标志物。

Identifying new potential genetic biomarkers for HELLP syndrome using massive parallel sequencing.

机构信息

Center For Research in Genetics and Genomics-CIGGUR, GENIUROS Research Group, School of Medicine and Health Sciences, Universidad del Rosario, Bogotá, Colombia.

Hospital Universitario Mayor Méderi, Universidad del Rosario, Bogotá, Colombia.

出版信息

Pregnancy Hypertens. 2020 Oct;22:181-190. doi: 10.1016/j.preghy.2020.09.003. Epub 2020 Sep 21.

Abstract

BACKGROUND

Preeclampsia (PE) is a frequently occurring multisystemic disease affecting ~5% of pregnancies. PE patients may develop HELLP syndrome (haemolysis, elevated liver enzymes, and low platelet), a mother and foetus life-threatening condition. Research into HELLP's genetic origin has been relatively unsuccessful, mainly because normal placental function and blood pressure regulation involve the fine-regulation of hundreds of genes.

OBJECTIVE

To identify new genes and mutations constituting potential biomarkers for HELLP syndrome.

STUDY DESIGN

The present case-control study involved whole-exome sequencing of 79 unrelated HELLP women. Candidate variants were screened in a control population constituted by 176 individuals. Stringent bioinformatics filters were used for selecting potentially etiological sequence variants in a subset of 487 genes. We used robust in silico mutation modelling for predicting the potential effect on protein structure.

RESULTS

We identified numerous sequence variants in genes related to angiogenesis/coagulation/blood pressure regulation, cell differentiation/communication/adhesion, cell cycle and transcriptional gene regulation, extracellular matrix biology, lipid metabolism and immunological response. Five sequence variants generated premature stop codons in genes playing an essential role in placental physiology (STOX1, PDGFD, IGF2, MMP1 and DNAH11). Six variants (ERAP1- p.Ile915Thr, ERAP2- p.Leu837Ser, COMT-p.His192Gln, CSAD-p.Pro418Ser, CDH1- p.Ala298Thr and CCR2-p.Met249Lys) led to destabilisation of protein structure as they had significant energy and residue interaction-related changes. We identified at least two mutations in 57% of patients, arguing in favour of a polygenic origin for the HELLP syndrome.

CONCLUSION

Our results provide novel evidence regarding PE/HELLP's genetic origin, leading to new biomarkers, having potential clinical usefulness, being proposed.

摘要

背景

子痫前期(PE)是一种常发生的多系统疾病,影响约 5%的妊娠。PE 患者可能会发展为 HELLP 综合征(溶血、肝酶升高和血小板减少),这是母婴生命威胁的情况。对 HELLP 的遗传起源的研究相对不成功,主要是因为正常胎盘功能和血压调节涉及数百个基因的精细调节。

目的

确定构成 HELLP 综合征潜在生物标志物的新基因和突变。

研究设计

本病例对照研究涉及对 79 例无关的 HELLP 女性进行全外显子组测序。在由 176 人组成的对照人群中筛选候选变体。使用严格的生物信息学筛选对 487 个候选基因中的一组进行选择潜在的病因序列变体。我们使用稳健的计算机突变建模来预测对蛋白质结构的潜在影响。

结果

我们在与血管生成/凝血/血压调节、细胞分化/通讯/粘附、细胞周期和转录基因调节、细胞外基质生物学、脂质代谢和免疫反应相关的基因中发现了许多序列变异。五个序列变异在在胎盘生理学中起重要作用的基因中产生了提前终止密码子(STOX1、PDGFD、IGF2、MMP1 和 DNAH11)。六个变体(ERAP1-p.Ile915Thr、ERAP2-p.Leu837Ser、COMT-p.His192Gln、CSAD-p.Pro418Ser、CDH1-p.Ala298Thr 和 CCR2-p.Met249Lys)导致蛋白质结构不稳定,因为它们具有显著的能量和残基相互作用变化。我们在 57%的患者中发现了至少两个突变,这表明 HELLP 综合征的遗传起源是多基因的。

结论

我们的结果提供了关于 PE/HELLP 遗传起源的新证据,导致了新的生物标志物的提出,具有潜在的临床应用价值。

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