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成人极低出生体重儿的 DNA 甲基化图谱。

DNA methylation profiles in adults born at extremely low birth weight.

机构信息

Department of Psychology, Neuroscience & Behaviour, McMaster University, Hamilton, ON, Canada.

Department of Biological Sciences, Cells and Systems Biology, Psychology and Physiology, University of Toronto, ON, Canada.

出版信息

Dev Psychopathol. 2022 Feb;34(1):19-36. doi: 10.1017/S0954579420000899. Epub 2020 Oct 19.

Abstract

Effects of stresses associated with extremely preterm birth may be biologically "recorded" in the genomes of individuals born preterm via changes in DNA methylation (DNAm) patterns. Genome-wide DNAm profiles were examined in buccal epithelial cells from 45 adults born at extremely low birth weight (ELBW; ≤1000 g) in the oldest known cohort of prospectively followed ELBW survivors (Mage = 32.35 years, 17 male), and 47 normal birth weight (NBW; ≥2500 g) control adults (Mage = 32.43 years, 20 male). Sex differences in DNAm profiles were found in both birth weight groups, but they were greatly enhanced in the ELBW group (77,895 loci) versus the NBW group (3,424 loci), suggesting synergistic effects of extreme prenatal adversity and sex on adult DNAm profiles. In men, DNAm profiles differed by birth weight group at 1,354 loci on 694 unique genes. Only two loci on two genes distinguished between ELBW and NBW women. Gene ontology (GO) and network analyses indicated that loci differentiating between ELBW and NBW men were abundant in genes within biological pathways related to neuronal development, synaptic transportation, metabolic regulation, and cellular regulation. Findings suggest increased sensitivity of males to long-term epigenetic effects of extremely preterm birth. Group differences are discussed in relation to particular gene functions.

摘要

极早产相关压力的影响可能会通过 DNA 甲基化(DNAm)模式的变化,在早产儿的基因组中被生物“记录”下来。研究人员检查了来自 45 名极低出生体重(ELBW;≤1000g)的成年人的口腔上皮细胞的全基因组 DNAm 图谱,这些成年人来自历史上已知的、最早的前瞻性 ELBW 幸存者队列(平均年龄为 32.35 岁,17 名男性),以及 47 名正常出生体重(NBW;≥2500g)的对照成年人(平均年龄为 32.43 岁,20 名男性)。在这两个出生体重组中都发现了 DNAm 图谱的性别差异,但在 ELBW 组中,这种差异大大增强(77895 个位点),而在 NBW 组中(3424 个位点)则有所增强,这表明极端产前逆境和性别对成年 DNAm 图谱有协同作用。在男性中,有 1354 个位点在 694 个独特基因上因出生体重组而不同。只有两个基因上的两个位点可以区分 ELBW 和 NBW 女性。基因本体论(GO)和网络分析表明,区分 ELBW 和 NBW 男性的基因在与神经元发育、突触运输、代谢调节和细胞调节相关的生物途径内的基因中丰富存在。研究结果表明,男性对极早产的长期表观遗传影响更为敏感。研究还讨论了组间差异与特定基因功能的关系。

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