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小麦Cab-1基因的5'-近端区域包含一个268碱基对的类增强子序列,用于光敏色素反应。

The 5'-proximal region of the wheat Cab-1 gene contains a 268-bp enhancer-like sequence for phytochrome response.

作者信息

Nagy F, Boutry M, Hsu M Y, Wong M, Chua N H

机构信息

Laboratory of Plant Molecular Biology, Rockefeller University, New York, NY 10021-6399.

出版信息

EMBO J. 1987 Sep;6(9):2537-42. doi: 10.1002/j.1460-2075.1987.tb02541.x.

DOI:10.1002/j.1460-2075.1987.tb02541.x
PMID:3315648
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC553671/
Abstract

We have previously reported that the expression of the wheat Cab-1 gene is subject to phytochrome regulation and a 1.8-kb 5' upstream sequence of this gene is sufficient for the regulated expression. To delineate sequences for the phytochrome response we analyzed a series of 5' deletion mutants as well as chimeric gene constructs comprising different sequences of the Cab-1 upstream region in transgenic tobacco seedlings. We found that a deletion mutant containing a 357-bp 5' upstream sequence still exhibits maximal levels of phytochrome-regulated expression. A 268-bp enhancer-like element, located between -89 and -357, is responsible for the phytochrome response of the Cab-1 gene; sequences upstream from -357 to -843 and downstream from -124 to +1100 are probably not involved. Finally, we show that the Cab-1 mRNA stability is not regulated by phytochrome.

摘要

我们之前报道过,小麦Cab-1基因的表达受光敏色素调控,该基因1.8 kb的5'上游序列足以实现调控表达。为了确定光敏色素应答的序列,我们分析了一系列5'缺失突变体以及包含Cab-1上游区域不同序列的嵌合基因构建体,这些构建体存在于转基因烟草幼苗中。我们发现,一个含有357 bp 5'上游序列的缺失突变体仍表现出光敏色素调控表达的最高水平。位于-89至-357之间的一个268 bp的增强子样元件负责Cab-1基因的光敏色素应答;-357至-843上游以及-124至+1100下游的序列可能不参与其中。最后,我们表明Cab-1 mRNA的稳定性不受光敏色素调控。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4938/553671/d9e53fc9b35b/emboj00249-0041-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4938/553671/9bf640fad3de/emboj00249-0039-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4938/553671/2d83a908ed40/emboj00249-0040-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4938/553671/fbb80293c980/emboj00249-0040-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4938/553671/d9e53fc9b35b/emboj00249-0041-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4938/553671/9bf640fad3de/emboj00249-0039-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4938/553671/2d83a908ed40/emboj00249-0040-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4938/553671/fbb80293c980/emboj00249-0040-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4938/553671/d9e53fc9b35b/emboj00249-0041-a.jpg

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本文引用的文献

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通过 STARR-seq 鉴定大麦中具有长程调控潜力的高度重复增强子。
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Identification of Plant Enhancers and Their Constituent Elements by STARR-seq in Tobacco Leaves.通过 STARR-seq 在烟草叶片中鉴定植物增强子及其组成元件。
Plant Cell. 2020 Jul;32(7):2120-2131. doi: 10.1105/tpc.20.00155. Epub 2020 May 14.
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Genome-Wide Prediction and Validation of Intergenic Enhancers in Arabidopsis Using Open Chromatin Signatures.利用开放染色质特征对拟南芥基因间增强子进行全基因组预测与验证
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