Department of Biological Sciences, Macquarie University, North Ryde, NSW, Australia.
Mol Ecol. 2021 Jan;30(2):481-498. doi: 10.1111/mec.15739. Epub 2020 Dec 10.
Local adaptation can occur at small spatial scales relative to the dispersal capacity of species. Alpine ecosystems have sharp environmental clines that offer an opportunity to investigate the effects of fine-scale shifts in species' niche breadth on adaptive genetic processes. Here we examine two grasshopper species endemic to the Australian Alps (Kosciuscola spp.) that differ in elevational niche breadth: one broader, K. usitatus (1400-2200 m), and one narrower, K. tristis (1600-2000 m). We examine signatures of selection with respect to environmental and morphological variables in two mountain regions using F outlier tests and environmental association analyses (EAAs) applied to single nucleotide polymorphism (SNP) data (K. usitatus: 9017 SNPs, n = 130; K. tristis: 7363 SNPs, n = 135). Stronger genetic structure was found in the more narrowly distributed K. tristis, which showed almost twice the number of SNPs under putative selection (10.8%) compared with K. usitatus (5.3%). When examining SNPs in common across species (n = 3058), 260 SNPs (8.5%) were outliers shared across species, and these were mostly associated with elevation, a proxy for temperature, suggesting parallel adaptive processes in response to climatic drivers. Additive polygenic scores (an estimate of the cumulative signal of selection across all candidate loci) were nonlinearly and positively correlated with elevation in both species. However, a steeper correlation in K. tristis indicated a stronger signal of spatially varying selection towards higher elevations. Our study illustrates that the niche breadth of co-occurring and related species distributed along the same environmental cline is associated with differences in patterns of microgeographical adaptation.
局部适应可以在相对物种扩散能力的小空间尺度上发生。高山生态系统具有明显的环境梯度,为研究物种生态位宽度的精细变化对适应性遗传过程的影响提供了机会。在这里,我们研究了两种澳大利亚阿尔卑斯山特有的(Kosciuscola spp.)蝗虫,它们的海拔生态位宽度不同:一种更宽,K. usitatus(1400-2200 m),另一种更窄,K. tristis(1600-2000 m)。我们使用 F 离群值测试和环境关联分析(EAAs),针对单核苷酸多态性(SNP)数据(K. usitatus:9017 个 SNPs,n=130;K. tristis:7363 个 SNPs,n=135),在两个山区研究了与环境和形态变量有关的选择特征。在分布范围较窄的 K. tristis 中发现了更强的遗传结构,与 K. usitatus 相比(5.3%),该物种有近两倍数量的 SNP (10.8%)被认为是受选择影响的。当检查跨越物种的 SNP 时(n=3058),有 260 个 SNP(8.5%)是跨越物种的离群 SNP,这些 SNP 主要与海拔有关,海拔是温度的一个代表,这表明在应对气候驱动因素时存在平行的适应性过程。在两个物种中,加性多基因评分(所有候选基因座的选择累积信号的估计)与海拔呈非线性正相关。然而,在 K. tristis 中,相关性更为陡峭,表明在较高海拔处存在空间变化选择的信号更强。我们的研究表明,沿同一环境梯度分布的共存和相关物种的生态位宽度与微地理适应模式的差异有关。