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中国山东省急性胃肠炎门诊患者 GII 诺如病毒的分子流行病学研究。

Molecular epidemiology of GII noroviruses in outpatients with acute gastroenteritis in Shandong Province, China.

机构信息

Department of Clinical Laboratory, Cheeloo College of Medicine, Qilu Hospital, Shandong University, Wenhua Xi Road 107, Jinan, 250012, Shandong, China.

Department of Rheumatology, Cheeloo College of Medicine, Qilu Hospital, Shandong University, Wenhua Xi Road 107, Jinan, 250012, Shandong, China.

出版信息

Arch Virol. 2021 Feb;166(2):375-387. doi: 10.1007/s00705-020-04883-1. Epub 2020 Nov 23.

Abstract

Noroviruses have been recognized as the most important causative agents of acute gastroenteritis. The present study was carried out to investigate the molecular epidemiological features of genotype II (GII) norovirus in outpatients with acute gastroenteritis in Shandong province in China from July 2017 to June 2018. In total, 151 (10.30%) samples were positive for NoV GII strains by RT-PCR. Eight genotypes were detected: GII.2, GII.3, GII.4, GII.6, GII.7, GII.12, GII.13 and GII.17. GII.4 (43.71%) was the most prevalent genotype, and the dominant strains belonged to the group of Sydney-2012 strains. GII.17 (27.15%), which has become the main cause of outbreaks of acute gastroenteritis in China, also accounted for a high proportion. Meanwhile, three recombinant types (GII.P17-GII.7, GII.P3-GII.4 and GII.P12-GII.4) were observed and authenticated using Simplot software. The results showed that GII norovirus was the main cause of acute gastroenteritis in Shandong province. GII.4 and GII.17 were the dominant genotypes. Continuous observation and identification of emerging genotypes are necessary for understanding the evolution of the virus, control of infection, and development of vaccines.

摘要

诺如病毒已被确认为急性肠胃炎的最重要病原体。本研究旨在调查 2017 年 7 月至 2018 年 6 月期间中国山东省门诊急性肠胃炎患者中基因型 II(GII)诺如病毒的分子流行病学特征。通过 RT-PCR,共检测到 151 份(10.30%)诺如病毒 GII 株阳性样本。检测到 8 种基因型:GII.2、GII.3、GII.4、GII.6、GII.7、GII.12、GII.13 和 GII.17。GII.4(43.71%)是最流行的基因型,优势株属于悉尼-2012 株组。GII.17(27.15%)在中国已成为急性肠胃炎暴发的主要原因,其占比也很高。同时,使用 Simplot 软件观察并证实了三种重组类型(GII.P17-GII.7、GII.P3-GII.4 和 GII.P12-GII.4)的存在。结果表明,GII 诺如病毒是山东省急性肠胃炎的主要病原体。GII.4 和 GII.17 是主要基因型。为了了解病毒的进化、感染控制和疫苗开发,有必要对新兴基因型进行持续观察和鉴定。

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