Department of Applied Chemistry and Biochemical Engineering, Graduate School of Engineering, Shizuoka University, Johoku 3-5-1, Hamamatsu, Shizuoka 432-8561, Japan.
Graduate School of Science and Technology, Gunma University, 1-5-1 Tenjin-cho, Kiryu, Gunma 376-8515, Japan.
J Chem Phys. 2020 Nov 28;153(20):201103. doi: 10.1063/5.0031356.
Stabilizing mechanisms of three possible isomers (phenolate-keto, phenolate-enol, and phenol-enolate) of the oxyluciferin anion hydrated with quantum explicit water molecules in the first singlet excited state were investigated using first-principles Born-Oppenheimer molecular dynamics simulations for up to 1.8 ns (or 3.7 × 10 MD steps), revealing that the surrounding water molecules were distributed to form clear single-layered structures for phenolate-keto and multi-layered structures for phenolate-enol and phenol-enolate isomers. The isomers employed different stabilizing mechanisms compared to the ground state. Only the phenolate-keto isomer became attracted to the water molecules in its excited state and was stabilized by increasing the number of hydrogen bonds with nearby water molecules. The most stable isomer in the excited state was the phenolate-keto, and the phenolate-enol and phenol-enolate isomers were higher in energy by ∼0.38 eV and 0.57 eV, respectively, than the phenolate-keto. This was in contrast to the case of ground state in which the phenolate-enol was the most stable isomer.
使用第一性原理 Born-Oppenheimer 分子动力学模拟对三种可能的同分异构体(氧杂荧光素阴离子的酚酮、酚烯醇和苯酚烯醇化物)在第一单重激发态与量子显式水分子水合的稳定机制进行了长达 1.8 ns(或 3.7×10 MD 步)的研究,结果表明,周围的水分子分布形成了酚酮同分异构体的清晰单层结构和酚烯醇及苯酚烯醇化物的多层结构。与基态相比,这些同分异构体采用了不同的稳定机制。只有酚酮同分异构体在激发态下被水分子吸引,并通过增加与附近水分子的氢键数量而得到稳定。在激发态下最稳定的异构体是酚酮,而酚烯醇和苯酚烯醇化物异构体的能量分别比酚酮高约 0.38 eV 和 0.57 eV。这与基态情况形成对比,在基态情况下,酚烯醇是最稳定的异构体。