Physical Chemistry I, Faculty of Chemistry and Biochemistry, Ruhr University Bochum, D-44780 Bochum, Germany.
Phys Chem Chem Phys. 2020 Dec 16;22(47):27903-27911. doi: 10.1039/d0cp03040f.
A common feature of intrinsically disordered proteins (IDPs) is a disorder-to-order transition upon binding to other proteins, which has been tied to multiple benefits, including accelerated association rates or binding with low affinity, yet high specificity. Given the balanced equilibrium concentrations of folded and unfolded state of an IDP we asked the question if changes in the chemical environment, such as the presence of osmolytes or crowding agents, have a strong influence on the interaction of an IDP. Here, we demonstrate the impact of cosolutes on the interaction of the intrinsically disordered transcription factor c-Myb and its binding partner, the kinase-inducible interaction domain (KIX) of the CREB-binding protein. Temperature jump relaxation kinetics and microscale thermophoresis were employed in order to quantify the rate constants and the binding affinity of the c-Myb/KIX complex, respectively, in the presence of various cosolutes. We find the binding free energy of the c-Myb/KIX complex only marginally modulated by cosolutes, whereas the enthalpy and entropy of the interaction are very sensitive to the respective solvent conditions. For different cosolutes we observe substantial changes in enthalpy, both favorable and unfavorable, which are going with entropy changes largely compensating the enthalpy effects in each case. These characteristics might reflect a potential mechanism by which c-Myb offsets changes in the physico-chemical environment to maintain a roughly unaltered binding affinity.
无规卷曲蛋白(IDPs)的一个共同特征是与其他蛋白质结合时会发生无序到有序的转变,这与多种益处相关,包括加速缔合速率或低亲和力但高特异性的结合。鉴于 IDP 折叠和未折叠状态的平衡平衡浓度,我们提出了这样一个问题,即化学环境的变化,如渗透剂或拥挤剂的存在,是否会对 IDP 的相互作用产生强烈影响。在这里,我们展示了共溶剂对转录因子 c-Myb 及其结合伴侣 CREB 结合蛋白激酶诱导相互作用结构域(KIX)之间相互作用的影响。采用温度跃变弛豫动力学和微尺度热泳法分别定量了存在各种共溶剂时 c-Myb/KIX 复合物的速率常数和结合亲和力。我们发现,c-Myb/KIX 复合物的结合自由能仅受共溶剂的轻微调节,而相互作用的焓和熵对各自的溶剂条件非常敏感。对于不同的共溶剂,我们观察到焓的显著变化,既有有利的也有不利的,这与熵的变化在每种情况下都很大程度上补偿了焓的影响。这些特征可能反映了 c-Myb 抵消物理化学环境变化以维持大致不变的结合亲和力的潜在机制。