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来自博茨瓦纳中区一个临时湿地的一种未描述的蚌虾属(鳃足纲:棘尾目)的完整线粒体基因组。

The complete mitogenome of an undescribed clam shrimp of the genus (Branchiopoda: Spinicaudata), from a temporary wetland in Central District, Botswana.

作者信息

Tladi Murphy, Dalu Tatenda, Rogers D Christopher, Nyamukondiwa Casper, Emami-Khoyi Arsalan, Oliver Jody C, Teske Peter R, Wasserman Ryan J

机构信息

Department of Biological Sciences and Biotechnology, Botswana International University of Science and Technology, Palapye, Botswana.

Department of Ecology and Resource Management, University of Venda, Thohoyandou, South Africa.

出版信息

Mitochondrial DNA B Resour. 2020 Feb 28;5(2):1238-1240. doi: 10.1080/23802359.2020.1731351. eCollection 2020.

DOI:10.1080/23802359.2020.1731351
PMID:33366925
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7510826/
Abstract

Clam shrimps (Spinicaudata) are a widespread and diverse crustacean group that frequent temporary aquatic habitats, but few complete mitochondrial genomes have been published for this group. Here, we report the mitogenome of an undescribed species from Botswana. Raw sequences were assembled into a single circular genome with a total length of 15,663 bp. Thirteen protein-coding genes, 22 tRNAs, and 2 rRNAs were identified using the MITOS pipeline. The mitogenome's GC content is 33.52%. Phylogenetic analysis using protein-coding genes confirmed that sp. is closely related to another member of the Limnadiidae, .

摘要

蚌虾(Spinicaudata)是一类广泛分布且种类多样的甲壳动物,常出没于临时性水生栖息地,但该类群已发表的完整线粒体基因组很少。在此,我们报告了一种来自博茨瓦纳的未描述物种的线粒体基因组。原始序列被组装成一个全长15,663 bp的单环基因组。使用MITOS管道鉴定出13个蛋白质编码基因、22个tRNA和2个rRNA。该线粒体基因组的GC含量为33.52%。使用蛋白质编码基因进行的系统发育分析证实,该物种与蚌科的另一个成员密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/738c/7510826/5bfaa7e80d0b/TMDN_A_1731351_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/738c/7510826/5bfaa7e80d0b/TMDN_A_1731351_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/738c/7510826/5bfaa7e80d0b/TMDN_A_1731351_F0001_B.jpg

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