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基于基因组数据的两种形式TLR5和TLR13基因的分子特征及进化分析

Molecular Characterization and Evolution Analysis of Two Forms of TLR5 and TLR13 Genes Base on Genome Data.

作者信息

Jiang Lihua, Pei Liyi, Wang Ping, Liu Liqin, Li Gong, Liu Binjian, Lǚ Zhenming, Hiromasa Tabata, Pan Hao, Ogura Atsushi

机构信息

National Engineering Research Center for Facilitated Marine Aquaculture, Zhejiang Ocean University, No. 1, South Haida Road, Dinghai District, Zhoushan, China.

Nagahama Institute of Bioscience and Technology, Tamura, Nagahama, Shiga, Japan.

出版信息

Int J Genomics. 2020 Dec 9;2020:4895037. doi: 10.1155/2020/4895037. eCollection 2020.

Abstract

TLRs (Toll-like receptors) are essential in host defense against pathogens. There are two types of TLR5, namely, membrane form of TLR5 (TLR5M) and soluble form of TLR5 (TLR5S), both of which perform a crucial role in flagellin response. TLR13 is a TLR that localizes to endosomes and recognizes nucleic acids released by internal microorganisms, including viruses, bacteria, and fungi. Here, the full-length coding sequence (CDS), protein structure, and immune response and subcellular localization of TLR5 (TLR5S) and TLR13 were characterized in large yellow croaker (). These TLRs share high sequence homology with other ichthyic TLRs, while also having their own characters; qtPCR was determined and the results found that the three genes were constitutively expressed in all examined tissues: TLR5M was highly expressed in the spleen and liver; TLR13 expression was high in the kidney, liver, and spleen. And TLRs were upregulated following stimulation with in the liver, spleen, and kidney. Immunofluorescence staining revealed that TLR5M were localized in the cytoplasm, while TLR5S and TLR13 were in the endosome. The evolutionary analysis has shown that TLR13 was clustered with TLR11, 19, 20, 21, and 22, while TLR5 and TLR3 were classified into a group; these results suggest that TLRs are vital in the defense of against bacterial infection and further increase our understanding of TLR function in innate immunity in teleosts.

摘要

Toll样受体(TLRs)在宿主抵御病原体的过程中至关重要。TLR5有两种类型,即膜形式的TLR5(TLR5M)和可溶性形式的TLR5(TLR5S),二者在鞭毛蛋白应答中均发挥关键作用。TLR13是一种定位于内体的TLR,可识别包括病毒、细菌和真菌在内的内部微生物释放的核酸。在此,对大黄鱼的TLR5(TLR5S)和TLR13的全长编码序列(CDS)、蛋白质结构、免疫应答及亚细胞定位进行了表征。这些TLR与其他鱼类TLR具有高度的序列同源性,同时也有自身特点;通过定量PCR检测发现,这三个基因在所有检测组织中均组成性表达:TLR5M在脾脏和肝脏中高表达;TLR13在肾脏、肝脏和脾脏中表达较高。在用[具体物质未给出]刺激后,肝脏、脾脏和肾脏中的TLR上调。免疫荧光染色显示,TLR5M定位于细胞质中,而TLR5S和TLR13定位于内体。进化分析表明,TLR13与TLR11、19、20、21和22聚类,而TLR5和TLR3分为一组;这些结果表明,TLR在大黄鱼抵御细菌感染中至关重要,并进一步增进了我们对硬骨鱼先天免疫中TLR功能的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be3a/7744196/b00606be4ce1/IJG2020-4895037.001.jpg

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