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家蚕前列腺素 E 合酶底物结合部位的研究。

Investigation of the Substrate-Binding Site of a Prostaglandin E Synthase in Bombyx mori.

机构信息

Department of Bioscience and Biotechnology, Kyushu University Graduate School, 744 Motooka, Nishi-ku, Fukuoka, 819- 0395, Fukuoka, Japan.

出版信息

Protein J. 2021 Feb;40(1):63-67. doi: 10.1007/s10930-020-09956-3. Epub 2021 Jan 5.

DOI:10.1007/s10930-020-09956-3
PMID:33403608
Abstract

Prostaglandin E synthase (PGES) catalyzes the conversion of prostaglandin H to prostaglandin E in the presence of glutathione (GSH) in mammals. Amid the limited knowledge on prostaglandin and its related enzymes in insects, we recently identified PGES from the silkworm Bombyx mori (bmPGES) and determined its crystal structure complexed with GSH. In the current study, we investigated the substrate-binding site of bmPGES by site-directed mutagenesis and X-ray crystallography. We found that the residues Tyr107, Val155, Met159, and Glu203 are located in the catalytic pockets of bmPGES, and mutagenesis of each residue reduced the bmPGES activity. Our results suggest that these four residues contribute to the catalytic activity of bmPGES. Overall, this structure-function study holds implications in controlling pests by designing rational and efficient pesticides.

摘要

前列腺素 E 合酶(PGES)在哺乳动物中,在谷胱甘肽(GSH)的存在下催化前列腺素 H 转化为前列腺素 E。在对昆虫中前列腺素及其相关酶的有限了解的情况下,我们最近从家蚕(Bombyx mori)中鉴定出前列腺素 E 合酶(bmPGES),并确定了其与 GSH 结合的晶体结构。在本研究中,我们通过定点突变和 X 射线晶体学研究了 bmPGES 的底物结合位点。我们发现残基 Tyr107、Val155、Met159 和 Glu203 位于 bmPGES 的催化口袋中,每个残基的突变都会降低 bmPGES 的活性。我们的结果表明,这四个残基对 bmPGES 的催化活性有贡献。总的来说,这项结构-功能研究对通过设计合理有效的杀虫剂来控制害虫具有重要意义。

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本文引用的文献

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Characterisation of a diazinon-metabolising glutathione S-transferase in the silkworm Bombyx mori by X-ray crystallography and genome editing analysis.利用 X 射线晶体学和基因组编辑分析技术对家蚕(Bombyx mori)中一种代谢二嗪磷的谷胱甘肽 S-转移酶进行表征。
Sci Rep. 2018 Nov 15;8(1):16835. doi: 10.1038/s41598-018-35207-8.
2
Role of glutathione S-transferases in detoxification of a polycyclic aromatic hydrocarbon, methylcholanthrene.谷胱甘肽 S-转移酶在多环芳烃,甲基胆蒽解毒中的作用。
Chem Biol Interact. 2018 Oct 1;294:81-90. doi: 10.1016/j.cbi.2018.08.023. Epub 2018 Aug 23.
3
Recent advances in protein engineering and biotechnological applications of glutathione transferases.
谷胱甘肽转移酶的蛋白质工程和生物技术应用的最新进展。
Crit Rev Biotechnol. 2018 Jun;38(4):511-528. doi: 10.1080/07388551.2017.1375890. Epub 2017 Sep 22.
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Glutathione-binding site of a bombyx mori theta-class glutathione transferase.家蚕θ类谷胱甘肽转移酶的谷胱甘肽结合位点
PLoS One. 2014 May 21;9(5):e97740. doi: 10.1371/journal.pone.0097740. eCollection 2014.
5
New insights into the catalytic mechanism of Bombyx mori prostaglandin E synthase gained from structure-function analysis.从结构功能分析中获得的对家蚕前列腺素 E 合酶催化机制的新认识。
Biochem Biophys Res Commun. 2013 Nov 1;440(4):762-7. doi: 10.1016/j.bbrc.2013.10.001. Epub 2013 Oct 8.
6
Three-dimensional structure of a Bombyx mori Omega-class glutathione transferase.家蚕 Omega 类谷胱甘肽转移酶的三维结构。
Biochem Biophys Res Commun. 2013 Sep 6;438(4):588-93. doi: 10.1016/j.bbrc.2013.08.011. Epub 2013 Aug 11.
7
Catalytic function of an ε-class glutathione S-transferase of the silkworm.家蚕 ε 类谷胱甘肽 S-转移酶的催化功能。
Insect Mol Biol. 2013 Oct;22(5):523-31. doi: 10.1111/imb.12041. Epub 2013 Jun 27.
8
Crystal structure of a Bombyx mori sigma-class glutathione transferase exhibiting prostaglandin E synthase activity.具有前列腺素E合酶活性的家蚕sigma类谷胱甘肽转移酶的晶体结构。
Biochim Biophys Acta. 2013 Jun;1830(6):3711-8. doi: 10.1016/j.bbagen.2013.02.021. Epub 2013 Mar 1.
9
Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase.家蚕δ-类谷胱甘肽转移酶催化活性的结构基础
Biochim Biophys Acta. 2012 Oct;1820(10):1469-74. doi: 10.1016/j.bbagen.2012.04.022. Epub 2012 May 8.
10
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