Integrated transcriptomics and metabolomics provide novel insight into changes in specialized metabolites in an albino tea cultivar (Camellia sinensis (L.) O. Kuntz).

Tea varieties with specific colours have often been studied by researchers. However, previous studies on the albinism of tea plants have mostly been based on plants with different genetic backgrounds or focused on common components in albino tea leaves, such as amino acids, flavones, and carotenoids. In this study, we conducted widely targeted metabolic and transcriptomic analyses between a wildtype tea genotype (Shuixian, LS) and its albino mutant (Huangjinshuixian, HS). At the molecular level, alteration of gene expression levels in the MEP pathway may have reduced the production of chlorophyll and carotenoids in HS, which could be the main cause of the phenotypic changes in HS. At the metabolite level, a large number of metabolites related to light protection that significantly accumulated in HS, including flavones, anthocyanins, flavonols, flavanones, vitamins and their derivatives, polyphenols, phenolamides. This result, combined with an enzyme activity experiment, suggested that the absence of photosynthetic pigments made the albino tea leaves of HS more vulnerable to UV stress, even under normal light conditions. In addition, except for the common amino acids, we also identified numerous nitrogen-containing compounds, including nucleotides and their derivates, amino acid derivatives, glycerophospholipids, and phenolamides, which implied that significant accumulation of NH in albino tea leaves could not only promote amino acid synthesis but could also activate other specialized metabolic pathways related to nitrogen metabolism. In conclusion, our results provide new information to guide further studies of the extensive metabolic reprogramming events caused by albinism in tea plants.