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鼠李科(鼠李科植物)的完整叶绿体基因组。

The complete chloroplast genome of (Rhamnaceae).

作者信息

Xie Yanping, Wang Ze, Jiang Xianfeng, Zhang Xingwang

机构信息

School of Life Sciences, Huaibei Normal University, Huaibei, China.

College of Life Sciences, Henan Normal University, Xinxiang, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 15;5(3):2830-2831. doi: 10.1080/23802359.2020.1791010.

Abstract

Bunge is a small shrub that can be used in the treatment of swollen poison, because of the antimicrobial activity. Here, we constructed the complete chloroplast genome of the using Illumina sequencing technology. The circular cp genome was 160,642 bp in size, and comprises a large single-copy (LSC) region of 88,889 bp, a small single-copy (SSC) region of 18,897 bp, and a pair of inverted repeats (IR) of 26,428 bp. The GC content was 37.14% overall, with 35.01%, 31.42%, and 42.75% for the LSC, SSC, and IR regions, respectively. The plastome comprised 129 unique genes including 81 protein-coding genes, 30 tRNAs, and 4 rRNAs. The ML phylogenetic analysis based on 44 chloroplast genomes in Rosales showed a strong sister relationship with species.

摘要

Bunge是一种小灌木,因其具有抗菌活性,可用于治疗肿毒。在此,我们利用Illumina测序技术构建了其完整的叶绿体基因组。环状叶绿体基因组大小为160,642 bp,包括一个88,889 bp的大单拷贝(LSC)区域、一个18,897 bp的小单拷贝(SSC)区域和一对26,428 bp的反向重复序列(IR)。总体GC含量为37.14%,LSC、SSC和IR区域的GC含量分别为35.01%、31.42%和42.75%。叶绿体基因组包含129个独特基因,包括81个蛋白质编码基因、30个tRNA和4个rRNA。基于蔷薇目44个叶绿体基因组的ML系统发育分析显示与 物种有很强的姐妹关系。

需注意,原文中“using Illumina sequencing technology.”前缺少具体植物名称;“The ML phylogenetic analysis based on 44 chloroplast genomes in Rosales showed a strong sister relationship with species.”中“ species”表述不完整。

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