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基于线粒体基因组推断皱鳃鲨的基因类型和系统发育位置。

Genetype and phylogenomic position of the frilled shark inferred from the mitochondrial genome.

作者信息

Bustamante Carlos, Bennett Michael B, Ovenden Jennifer R

机构信息

Shark and Ray Research Group, School of Biomedical Sciences, The University of Queensland, St Lucia, QLD, Australia.

Molecular Fisheries Laboratory, School of Biomedical Sciences, The University of Queensland, St Lucia, QLD, Australia.

出版信息

Mitochondrial DNA B Resour. 2016 Feb 1;1(1):18-20. doi: 10.1080/23802359.2015.1137801.

Abstract

The genetype of from Australian waters is described using the whole mitochondrial genome obtained from Illumina NGS technology. Total length of the mitogenome is 17 313 bp, consisting of 2 rRNAs, 13 protein-coding genes, 22 tRNA genes and 2 non-coding regions thus updating the previously available mitogenome for this species. The phylogenomic reconstruction comprising all available species of Superorder Squalomorphi supports the inclusion of . in a divergent clade inside Order Hexanchiformes. Phyletic relationships inferred from the whole mitochondrial genomes are in agreement with traditional taxonomy. The low divergence between genomes (>99.9% genetic identity) is consistent with a widespread population in the west Pacific Ocean.

摘要

利用从Illumina NGS技术获得的完整线粒体基因组,对来自澳大利亚海域的[物种名称未给出]的基因型进行了描述。线粒体基因组全长17313 bp,由2个rRNA、13个蛋白质编码基因、22个tRNA基因和2个非编码区组成,从而更新了该物种先前可用的线粒体基因组。包含角鲨总目所有可用物种的系统发育重建支持将[物种名称未给出]归入六鳃鲨目内一个不同的分支中。从完整线粒体基因组推断出的系统发育关系与传统分类学一致。[物种名称未给出]基因组之间的低差异(>99.9%的遗传同一性)与西太平洋广泛分布的种群一致。

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