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秀丽隐杆线虫种群内纵向寿命的个体间分析确定 W09D10.4 是一种新的与 AMPK 相关的缩短健康寿命的因子。

Intrapopulation analysis of longitudinal lifespan in Caenorhabditis elegans identifies W09D10.4 as a novel AMPK-associated healthspan shortening factor.

机构信息

Department of Molecular Medicine, Graduate School of Pharmaceutical Science, Kumamoto University, 5-1 Oe-honmachi, Chuo-ku, Kumamoto, 862-0973, Japan; Program for Leading Graduate Schools "HIGO (Health Life Science: Interdisciplinary and Global Oriented) Program", 5-1 Oe-honmachi, Chuo-ku, Kumamoto, 862-0973, Japan.

Department of Electrical and Computer Engineering, Kumamoto University, 2-39-1 Kurokami, Chuo-ku, Kumamoto, 860-8555, Japan.

出版信息

J Pharmacol Sci. 2021 Mar;145(3):241-252. doi: 10.1016/j.jphs.2020.12.004. Epub 2020 Dec 29.

Abstract

Caenorhabditis elegans is a model organism widely used for longevity studies. Current advances have been made in the methods that allow automated monitoring of C. elegans behavior. However, ordinary manual assays as well as automated methods have yet to achieve qualitative whole-life analysis of C. elegans longevity based on intrapopulation variation. Here, we utilized live-cell analysis system to determine the parameters of nematode lifespans. Image-based superposition method enabled to determine not only frailty in worms, but also to measure individual and longitudinal lifespan, healthspan, and frailspan. Notably, k-means clustering via principal component analysis revealed four clusters with distinct longevity patterns in wild-type C. elegans. Physiological relevance of clustering was confirmed by assays with pharmacological and/or genetic manipulation of AMP-activated protein kinase (AMPK), a crucial regulator of healthspan. Finally, we focused on W09D10.4 among the possible regulators extracted by integrative expression analysis with existing data sets. Importantly, W09D10.4 knockdown increased the high-healthspan populations only in the presence of AMPK, suggesting that W09D10.4 is a novel AMPK-associated healthspan shortening factor in C. elegans. Overall, the study establishes a novel platform of longitudinal lifespan in C. elegans, which is user-friendly, and may be a useful pharmacological tool to identify healthspan modulatory factors.

摘要

秀丽隐杆线虫是一种广泛用于寿命研究的模式生物。目前已经在允许自动监测秀丽隐杆线虫行为的方法上取得了进展。然而,普通的手动分析和自动化方法尚未实现基于种群内变异的秀丽隐杆线虫寿命的定性全生命周期分析。在这里,我们利用活细胞分析系统来确定线虫寿命的参数。基于图像的叠加方法不仅可以确定线虫的脆弱性,还可以测量个体和纵向寿命、健康寿命和脆弱寿命。值得注意的是,通过主成分分析的 K 均值聚类揭示了在野生型秀丽隐杆线虫中具有不同长寿模式的四个聚类。聚类的生理相关性通过药理学和/或 AMP 激活蛋白激酶 (AMPK) 的遗传操作来验证,AMPK 是健康寿命的关键调节剂。最后,我们集中研究了通过与现有数据集的综合表达分析提取的可能调节剂中的 W09D10.4。重要的是,只有在 AMPK 存在的情况下,W09D10.4 的敲低才会增加高健康寿命群体,这表明 W09D10.4 是秀丽隐杆线虫中一种新的与 AMPK 相关的健康寿命缩短因子。总的来说,该研究建立了秀丽隐杆线虫纵向寿命的新平台,该平台用户友好,可能是识别健康寿命调节因子的有用药理学工具。

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