Suppr超能文献

小鼠强迫游泳试验的效应大小、样本量和效能:优化可重复性的研究者指南。

Effect size, sample size and power of forced swim test assays in mice: Guidelines for investigators to optimize reproducibility.

作者信息

Smalheiser Neil R, Graetz Elena E, Yu Zhou, Wang Jing

机构信息

Department of Psychiatry, University of Illinois School of Medicine, Chicago, Illinois, United States of America.

Department of Mathematics, Statistics, and Computer Science, University of Illinois at Chicago, Chicago, Illinois, United States of America.

出版信息

PLoS One. 2021 Feb 24;16(2):e0243668. doi: 10.1371/journal.pone.0243668. eCollection 2021.

Abstract

A recent flood of publications has documented serious problems in scientific reproducibility, power, and reporting of biomedical articles, yet scientists persist in their usual practices. Why? We examined a popular and important preclinical assay, the Forced Swim Test (FST) in mice used to test putative antidepressants. Whether the mice were assayed in a naïve state vs. in a model of depression or stress, and whether the mice were given test agents vs. known antidepressants regarded as positive controls, the mean effect sizes seen in the experiments were indeed extremely large (1.5-2.5 in Cohen's d units); most of the experiments utilized 7-10 animals per group which did have adequate power to reliably detect effects of this magnitude. We propose that this may at least partially explain why investigators using the FST do not perceive intuitively that their experimental designs fall short-even though proper prospective design would require ~21-26 animals per group to detect, at a minimum, large effects (0.8 in Cohen's d units) when the true effect of a test agent is unknown. Our data provide explicit parameters and guidance for investigators seeking to carry out prospective power estimation for the FST. More generally, altering the real-life behavior of scientists in planning their experiments may require developing educational tools that allow them to actively visualize the inter-relationships among effect size, sample size, statistical power, and replicability in a direct and intuitive manner.

摘要

最近大量的出版物记录了生物医学文章在科学可重复性、效力和报告方面的严重问题,但科学家们仍坚持他们的惯常做法。为什么呢?我们研究了一种流行且重要的临床前试验,即用于测试假定抗抑郁药的小鼠强迫游泳试验(FST)。无论小鼠是在未处理状态下进行试验,还是在抑郁或应激模型中进行试验,以及小鼠是给予测试药物还是被视为阳性对照的已知抗抑郁药,实验中观察到的平均效应大小确实极大(科恩d值为1.5 - 2.5);大多数实验每组使用7 - 10只动物,这些动物确实有足够的效力来可靠地检测这种大小的效应。我们认为,这可能至少部分解释了为什么使用FST的研究人员没有直观地意识到他们的实验设计存在不足——尽管当测试药物的真实效应未知时,正确的前瞻性设计每组至少需要约21 - 26只动物才能检测到较大效应(科恩d值为0.8)。我们的数据为寻求对FST进行前瞻性效力估计的研究人员提供了明确的参数和指导。更普遍地说,要改变科学家在规划实验时的实际行为,可能需要开发教育工具,使他们能够以直接和直观的方式积极地可视化效应大小、样本大小、统计效力和可重复性之间的相互关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6edb/7904226/68106151b01f/pone.0243668.g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验