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燕子自聚集结构域的结构特征。

Structural characterization of the self-association domain of swallow.

机构信息

Department of Chemistry, Lewis & Clark College, Portland, Oregon, USA.

Department of Biochemistry and Biophysics, Oregon State University, Corvallis, Oregon, USA.

出版信息

Protein Sci. 2021 May;30(5):1056-1063. doi: 10.1002/pro.4055. Epub 2021 Mar 9.

DOI:10.1002/pro.4055
PMID:33641207
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8040862/
Abstract

Swallow, a 62 kDa multidomain protein, is required for the proper localization of several mRNAs involved in the development of Drosophila oocytes. The dimerization of Swallow depends on a 71-residue self-association domain in the center of the protein sequence, and is significantly stabilized by a binding interaction with dynein light chain (LC8). Here, we detail the use of solution-state nuclear magnetic resonance spectroscopy to characterize the structure of this self-association domain, thereby establishing that this domain forms a parallel coiled-coil and providing insight into how the stability of the dimerization interaction is regulated.

摘要

Swallow 是一种 62kDa 的多功能蛋白,对于几个在果蝇卵母细胞发育中涉及的 mRNA 的正确定位是必需的。Swallow 的二聚化依赖于蛋白质序列中心的一个 71 个残基的自组装结构域,并且与动力蛋白轻链(LC8)的结合相互作用显著稳定。在这里,我们详细介绍了使用溶液态核磁共振波谱法来对该自组装结构域的结构进行特征分析,从而证实了该结构域形成了一个平行的卷曲螺旋,并提供了对二聚化相互作用稳定性如何受到调节的深入了解。

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1
Structural characterization of the self-association domain of swallow.燕子自聚集结构域的结构特征。
Protein Sci. 2021 May;30(5):1056-1063. doi: 10.1002/pro.4055. Epub 2021 Mar 9.
2
Structure and dynamics of LC8 complexes with KXTQT-motif peptides: swallow and dynein intermediate chain compete for a common site.含有KXTQT基序肽的LC8复合物的结构与动力学:吞咽蛋白和动力蛋白中间链竞争一个共同位点。
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Structural features of LC8-induced self-association of swallow.LC8 诱导 swallow 自缔合的结构特征。
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4
Dynein light chain LC8 promotes assembly of the coiled-coil domain of swallow protein.动力蛋白轻链LC8促进吞咽蛋白卷曲螺旋结构域的组装。
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Light chain-dependent self-association of dynein intermediate chain.动力蛋白中间链的轻链依赖性自身缔合。
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Differences in dynamic structure of LC8 monomer, dimer, and dimer-peptide complexes.LC8单体、二聚体和二聚体-肽复合物的动态结构差异。
Biochemistry. 2008 Nov 18;47(46):11940-52. doi: 10.1021/bi801093k. Epub 2008 Oct 23.
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Analysis of a swallow homologue from Drosophila pseudoobscura.对拟暗果蝇中一种吞咽同源物的分析。
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本文引用的文献

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Structures of autoinhibited and polymerized forms of CARD9 reveal mechanisms of CARD9 and CARD11 activation.自抑制和聚合形式的 CARD9 结构揭示了 CARD9 和 CARD11 激活的机制。
Nat Commun. 2019 Jul 11;10(1):3070. doi: 10.1038/s41467-019-10953-z.
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Regulation of measles virus gene expression by P protein coiled-coil properties.麻疹病毒蛋白卷曲螺旋特性对其基因表达的调控。
Sci Adv. 2019 May 8;5(5):eaaw3702. doi: 10.1126/sciadv.aaw3702. eCollection 2019 May.
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Programmable design of orthogonal protein heterodimers.可编程设计正交蛋白异源二聚体。
Nature. 2019 Jan;565(7737):106-111. doi: 10.1038/s41586-018-0802-y. Epub 2018 Dec 19.
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UniProt: a worldwide hub of protein knowledge.UniProt:蛋白质知识的全球枢纽。
Nucleic Acids Res. 2019 Jan 8;47(D1):D506-D515. doi: 10.1093/nar/gky1049.
5
Antiparallel Coiled-Coil Interactions Mediate the Homodimerization of the DNA Damage-Repair Protein PALB2.反向平行卷曲螺旋相互作用介导DNA损伤修复蛋白PALB2的同源二聚化。
Biochemistry. 2018 Nov 27;57(47):6581-6591. doi: 10.1021/acs.biochem.8b00789. Epub 2018 Nov 8.
6
Nuclear Magnetic Resonance Structures of GCN4p Are Largely Conserved When Ion Pairs Are Disrupted at Acidic pH but Show a Relaxation of the Coiled Coil Superhelix.当离子对在酸性pH值下被破坏时,GCN4p的核磁共振结构在很大程度上是保守的,但显示出卷曲螺旋超螺旋的松弛。
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The adaptor protein CIN85 assembles intracellular signaling clusters for B cell activation.衔接蛋白CIN85组装用于B细胞活化的细胞内信号簇。
Sci Signal. 2016 Jun 28;9(434):ra66. doi: 10.1126/scisignal.aad6275.
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Competition between Coiled-Coil Structures and the Impact on Myosin-10 Bundle Selection.卷曲螺旋结构之间的竞争及其对肌球蛋白-10束选择的影响。
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Multivalent IDP assemblies: Unique properties of LC8-associated, IDP duplex scaffolds.多价内在无序蛋白聚集体:与LC8相关的内在无序蛋白双链支架的独特性质
FEBS Lett. 2015 Sep 14;589(19 Pt A):2543-51. doi: 10.1016/j.febslet.2015.07.032. Epub 2015 Jul 29.
10
NMR Characterization of Self-Association Domains Promoted by Interactions with LC8 Hub Protein.通过与LC8中心蛋白相互作用促进的自缔合结构域的核磁共振表征
Comput Struct Biotechnol J. 2014 Feb 25;9:e201402003. doi: 10.5936/csbj.201402003. eCollection 2014.