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中国 Wilson 病患者中 的流行致病变体:地理分布和创始效应。

Prevalent Pathogenic Variants of in Chinese Patients with Wilson's Disease: Geographical Distribution and Founder Effect.

机构信息

Department of Neurology and Research Center of Neurology in Second Affiliated Hospital, and Key Laboratory of Medical Neurobiology of Zhejiang Province, Zhejiang University School of Medicine, Hangzhou 310009, China.

出版信息

Genes (Basel). 2021 Feb 25;12(3):336. doi: 10.3390/genes12030336.

Abstract

Wilson's disease (WD) is an autosomal recessive disorder caused by pathogenic variants. This study aimed to show the geographical distribution and haplotype spectrum of three prevalent pathogenic variants (p.R778L, p.P992L, p.T935M) in mainland Chinese population and clarify whether the founder effect may account for their origins. We firstly summarized the frequency and geographical distribution of p.R778L, p.P992L and p.T935M in 715 WD patients. Then, to construct haplotypes associated with the three variants, Sanger sequencing and microsatellite typing at three dinucleotide-repeat markers (D13S314, D13S301, D13S316) flanking the gene were performed in 102 WD families. An obvious regional-specific distribution feature was found in p.T935M. Linkage disequilibrium at the three markers was shown in all the three variants and we found the common haplotypes specific for p.R778L, p.P992L and p.T935M respectively, represented successively by 10-7-7, 10-9-5 and 12-4-8, which all exhibited great significance vs. the control chromosomes ( < 0.01). Meanwhile, haplotypes for the three variants differed from the studies in other regions to some extent. The common haplotypes we found indicate that three prevalent pathogenic variants emerge due to the founder effect. Furthermore, the study contributes to expand our knowledge of the genetic diversity of WD from a cross-regional perspective.

摘要

威尔逊病(WD)是一种常染色体隐性遗传病,由致病性变异引起。本研究旨在展示三种常见致病性变异(p.R778L、p.P992L 和 p.T935M)在中国大陆人群中的地理分布和单倍型谱,并阐明是否存在起源的奠基者效应。我们首先总结了 715 例 WD 患者中 p.R778L、p.P992L 和 p.T935M 的频率和地理分布。然后,为了构建与这三种变异相关的单倍型,我们对 102 个 WD 家系进行了 Sanger 测序和三个二核苷酸重复标记(D13S314、D13S301、D13S316)侧翼基因的微卫星分型。在 p.T935M 中发现了明显的区域性特定分布特征。在所有三种变异中,三个标记均显示出连锁不平衡,我们分别发现了与 p.R778L、p.P992L 和 p.T935M 相关的常见单倍型,分别为 10-7-7、10-9-5 和 12-4-8,与对照染色体相比均具有显著意义(<0.01)。同时,三种变异的单倍型与其他地区的研究有一定程度的不同。我们发现的常见单倍型表明,三种常见致病性变异是由于奠基者效应而出现的。此外,本研究有助于从跨区域的角度扩展我们对 WD 遗传多样性的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b5a/7996491/e804a714870b/genes-12-00336-g001.jpg

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