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甘蔗橙锈病菌的基因组序列资源草案

Draft Genome Sequence Resource for the Orange Rust Pathogen of Sugarcane .

作者信息

Cardenas Daniela E, Cheema Jitender, Oppelaar Theodora S, Hincapie Martha, Sood Sushma, Zheng Qiaolin, Carrillo-Tarazona Yisel, Huguet-Tapia Jose, Saunders Diane G O, Comstock Jack C, Rott Philippe C, Cano Liliana M

机构信息

University of Florida, Institute of Food and Agricultural Sciences, Plant Pathology Department, Indian River Research and Education Center, Fort Pierce, FL, 34945, U.S.A.

University of Florida, Institute of Food and Agricultural Sciences, Plant Pathology Department, Everglades Research and Education Center, Belle Glade, FL, 33430, U.S.A.

出版信息

Phytopathology. 2021 Oct;111(10):1893-1896. doi: 10.1094/PHYTO-01-21-0008-A. Epub 2021 Nov 3.

Abstract

is an obligate biotrophic fungal pathogen that causes orange rust of sugarcane, which is prevalent in many countries around the globe. In the United States, orange rust was first detected in sugarcane in Florida in 2007 and poses a persistent and economically damaging threat to the sugarcane industry in this region. Here, we generated the first genome assemblies for two isolates of (1040 and 2143) collected in Florida in 2017 from two sugarcane cultivars, CL85-1040 and CP89-2143, respectively. These two rust genome resources will be of immense value for future genomic studies, particularly further exploration of the predicted secretomes that may help define key pathogenicity determinants for this economically important pathogen.

摘要

是一种专性活体营养型真菌病原体,可引发甘蔗橙锈病,该病在全球许多国家都很普遍。在美国,2007年首次在佛罗里达州的甘蔗中检测到橙锈病,对该地区的甘蔗产业构成持续且具有经济破坏性的威胁。在此,我们为2017年从佛罗里达州的两个甘蔗品种CL85 - 1040和CP89 - 2143中分别采集的两个分离株(1040和2143)生成了首个基因组组装。这两个锈病基因组资源对于未来的基因组研究将具有巨大价值,特别是对预测的分泌蛋白组的进一步探索,这可能有助于确定这种经济上重要的病原体的关键致病决定因素。

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