Department of Advanced Interdisciplinary, Graduate School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.
Department of Chemistry, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.
Curr Opin Chem Biol. 2021 Jun;62:82-89. doi: 10.1016/j.cbpa.2021.02.013. Epub 2021 Mar 26.
Targeting of extracellular protein-protein interactions (PPI) is emerging as a major application for de novo discovered macrocyclic peptides. Modern discovery platforms can routinely identify macrocyclic peptide ligands capable of highly selective modulation of extracellular signaling pathways; amenability to chemical synthesis and natural modularity of peptides additionally provides an avenue for their further structural elaboration, while the challenge of cell internalization can be minimized. Here, we discuss the recent progress in targeting extracellular PPIs with macrocyclic peptides by focusing on a number of recent case studies. We analyze the scope and potential limitations of the discovery systems in identifying functional macrocyclic ligands. We also highlight the recent technical advancements allowing for a more streamlined discovery pipeline and our brief perspective in this field.
靶向细胞外蛋白-蛋白相互作用(PPI)正成为新发现的大环肽的主要应用方向。现代发现平台通常能够识别出能够高度选择性调节细胞外信号通路的大环肽配体;肽的化学合成和天然模块化使其具有进一步结构修饰的途径,而细胞内化的挑战则可以最小化。在这里,我们通过关注一些最近的案例研究,讨论了用大环肽靶向细胞外 PPI 的最新进展。我们分析了发现系统在识别功能大环配体方面的范围和潜在局限性。我们还强调了最近允许更精简的发现管道的技术进步,以及我们在该领域的简要观点。