Peiffer Amanda L, Garlick Julie M, Wu Yujin, Soellner Matthew B, Brooks Charles L, Mapp Anna K
Life Sciences Institute, University of Michigan, Ann Arbor, MI 48019.
Program in Chemical Biology, University of Michigan, Ann Arbor, MI 48109.
bioRxiv. 2021 Mar 27:2021.03.22.436465. doi: 10.1101/2021.03.22.436465.
The COVID-19 pandemic has highlighted the need for new antiviral targets, as many of the currently approved drugs have proven ineffective against mitigating SARS-CoV-2 infections. The host transmembrane serine protease TMPRSS2 is a highly promising antiviral target, as it plays a direct role in priming the spike protein before viral entry occurs. Further, unlike other targets such as ACE2, TMPRSS2 has no known biological role. Here we utilize virtual screening to curate large libraries into a focused collection of potential inhibitors. Optimization of a recombinant expression and purification protocol for the TMPRSS2 peptidase domain facilitates subsequent biochemical screening and characterization of selected compounds from the curated collection in a kinetic assay. In doing so, we demonstrate that serine protease inhibitors camostat, nafamostat, and gabexate inhibit through a covalent mechanism. We further identify new non-covalent compounds as TMPRSS2 protease inhibitors, demonstrating the utility of a combined virtual and experimental screening campaign in rapid drug discovery efforts.
新冠疫情凸显了对新抗病毒靶点的需求,因为目前许多已获批的药物在减轻新冠病毒感染方面已被证明无效。宿主跨膜丝氨酸蛋白酶TMPRSS2是一个极具潜力的抗病毒靶点,因为它在病毒进入之前对刺突蛋白的启动过程中发挥直接作用。此外,与其他靶点如ACE2不同,TMPRSS2没有已知的生物学作用。在此,我们利用虚拟筛选将大型文库整理成一组潜在抑制剂的聚焦集合。优化TMPRSS2肽酶结构域的重组表达和纯化方案,有助于随后在动力学测定中对从整理后的集合中选择的化合物进行生化筛选和表征。通过这样做,我们证明了丝氨酸蛋白酶抑制剂卡莫司他、那法莫司他和加贝酯通过共价机制发挥抑制作用。我们进一步鉴定出新型非共价化合物作为TMPRSS2蛋白酶抑制剂,证明了在快速药物发现工作中联合虚拟和实验筛选活动的实用性。