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土耳其本土各种绵羊品种的胎盘特征分类

Placental Characteristics Classification of Various Native Turkish Sheep Breeds.

作者信息

Şen Uğur, Önder Hasan, Şirin Emre, Özyürek Selçuk, Piwczynski Dariusz, Kolenda Magdalena, Ocak Yetişgin Sezen

机构信息

Department of Agricultural Biotechnology, Ondokuz Mayis University, Samsun 55139, Turkey.

Department of Animal Science, Ondokuz Mayis University, Samsun 55139, Turkey.

出版信息

Animals (Basel). 2021 Mar 25;11(4):930. doi: 10.3390/ani11040930.

Abstract

The aim of this study was to classify placental characteristics of Akkaraman, Morkaraman, Karayaka, Awassi, Malya, and Bafra sheep breeds using the hierarchical clustering method. In total, 240 individual data records were used as experimental material. Placental characteristics such as total cotyledon surface area, small and large cotyledon length, small cotyledon depth, etc. were used as explanatory variables to classify the breeds' characteristics. Hierarchical clustering was used with the nearest neighbour method with Euclidean distance in order to classify the sheep breeds' variations. As a result, six breeds were separated into three clusters: the first cluster consisted of Bafra, Karayaka, and Awassi breeds; the second consisted of Akkaraman and Malya breeds; and the third cluster included only the Morkaraman breed. Bafra and Karayaka were pointed as the nearest breeds, with a similarity of 98.7% in terms of placental characteristics. The similarity rate of the Akkaraman and Malya breeds was at a level of 97.5%, whereas it was 96.8% for Bafra, Karayaka, and Awassi breeds. The similarity of Akkaraman, Karayaka, Awassi, Malya, and Bafra sheep breeds was estimated as 95.7%. The overall similarity was found to be at a level of 93.2% among sheep breeds. The outcomes of the study might be useful as a selection tool for reproductivity and can be used to select the breed to be reared.

摘要

本研究的目的是使用层次聚类方法对阿卡拉曼、莫尔卡拉曼、卡拉亚卡、阿瓦西、马尔亚和巴夫拉绵羊品种的胎盘特征进行分类。总共240条个体数据记录被用作实验材料。胎盘特征如总子叶表面积、大小子叶长度、小子叶深度等被用作解释变量来对品种特征进行分类。为了对绵羊品种的差异进行分类,采用了最近邻法和欧几里得距离的层次聚类。结果,六个品种被分为三个聚类:第一个聚类由巴夫拉、卡拉亚卡和阿瓦西品种组成;第二个聚类由阿卡拉曼和马尔亚品种组成;第三个聚类仅包括莫尔卡拉曼品种。巴夫拉和卡拉亚卡被指出是最相近的品种,在胎盘特征方面相似度为98.7%。阿卡拉曼和马尔亚品种的相似度为97.5%,而巴夫拉、卡拉亚卡和阿瓦西品种的相似度为96.8%。阿卡拉曼、卡拉亚卡、阿瓦西、马尔亚和巴夫拉绵羊品种的相似度估计为95.7%。绵羊品种之间的总体相似度为93.2%。该研究结果可能作为繁殖力的选择工具有用,并可用于选择饲养的品种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc57/8064391/d8375b914c4c/animals-11-00930-g001.jpg

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