• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

肌红蛋白突变体的生物催化作用,其中包含通过基因整合的非天然氨基酸。

Abiological catalysis by myoglobin mutant with a genetically incorporated unnatural amino acid.

机构信息

Department of Chemistry and Biochemistry, The University of Texas at Arlington, Arlington, TX, U.S.A.

Department of Anesthesiology, University of Nebraska Medical Center, Omaha, NE 68198, U.S.A.

出版信息

Biochem J. 2021 May 14;478(9):1795-1808. doi: 10.1042/BCJ20210091.

DOI:10.1042/BCJ20210091
PMID:33821889
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10071548/
Abstract

To inculcate biocatalytic activity in the oxygen-storage protein myoglobin (Mb), a genetically engineered myoglobin mutant H64DOPA (DOPA = L-3,4-dihydroxyphenylalanine) has been created. Incorporation of unnatural amino acids has already demonstrated their ability to accomplish many non-natural functions in proteins efficiently. Herein, the presence of redox-active DOPA residue in the active site of mutant Mb presumably stabilizes the compound I in the catalytic oxidation process by participating in an additional hydrogen bonding (H-bonding) as compared to the WT Mb. Specifically, a general acid-base catalytic pathway was achieved due to the availability of the hydroxyl moieties of DOPA. The reduction potential values of WT (E° = -260 mV) and mutant Mb (E° = -300 mV), w.r.t. Ag/AgCl reference electrode, in the presence of hydrogen peroxide, indicated an additional H-bonding in the mutant protein, which is responsible for the peroxidase activity of the mutant Mb. We observed that in the presence of 5 mM H2O2, H64DOPA Mb oxidizes thioanisole and benzaldehyde with a 10 and 54 folds higher rate, respectively, as opposed to WT Mb. Based on spectroscopic, kinetic, and electrochemical studies, we deduce that DOPA residue, when present within the distal pocket of mutant Mb, alone serves the role of His/Arg-pair of peroxidases.

摘要

为了在储氧蛋白肌红蛋白(Mb)中引入生物催化活性,已经构建了一种经过基因工程改造的肌红蛋白突变体 H64DOPA(DOPA = L-3,4-二羟基苯丙氨酸)。非天然氨基酸的掺入已经证明了它们在蛋白质中高效完成许多非天然功能的能力。在此,突变体 Mb 活性位点中存在氧化还原活性的 DOPA 残基,通过参与额外的氢键(H 键),与 WT Mb 相比,可能在催化氧化过程中稳定化合物 I。具体而言,由于 DOPA 的羟基部分的可用性,实现了一般的酸碱催化途径。WT(E° = -260 mV)和突变体 Mb(E° = -300 mV)的还原电位值,相对于 Ag/AgCl 参比电极,在存在过氧化氢的情况下,表明突变体蛋白中存在额外的 H 键,这是突变体 Mb 过氧化物酶活性的原因。我们观察到,在存在 5 mM H2O2 的情况下,H64DOPA Mb 分别以 10 倍和 54 倍的更高速率氧化硫代茴香醚和苯甲醛,而 WT Mb 则没有。基于光谱、动力学和电化学研究,我们推断当 DOPA 残基存在于突变体 Mb 的远端口袋中时,它独自充当过氧化物酶的 His/Arg 对的作用。

相似文献

1
Abiological catalysis by myoglobin mutant with a genetically incorporated unnatural amino acid.肌红蛋白突变体的生物催化作用,其中包含通过基因整合的非天然氨基酸。
Biochem J. 2021 May 14;478(9):1795-1808. doi: 10.1042/BCJ20210091.
2
Molecular engineering of myoglobin: influence of residue 68 on the rate and the enantioselectivity of oxidation reactions catalyzed by H64D/V68X myoglobin.肌红蛋白的分子工程:H64D/V68X肌红蛋白中68位残基对氧化反应速率及对映选择性的影响
Biochemistry. 2003 Sep 2;42(34):10174-81. doi: 10.1021/bi034605u.
3
Improved rate of substrate oxidation catalyzed by genetically-engineered myoglobin.基因工程改造的肌红蛋白催化的底物氧化速率提高。
Arch Biochem Biophys. 2018 Feb 1;639:44-51. doi: 10.1016/j.abb.2017.12.014. Epub 2017 Dec 23.
4
Proximal ligand control of heme iron coordination structure and reactivity with hydrogen peroxide: investigations of the myoglobin cavity mutant H93G with unnatural oxygen donor proximal ligands.血红素铁配位结构的近端配体控制及其与过氧化氢的反应性:对具有非天然氧供体近端配体的肌红蛋白腔突变体H93G的研究。
J Inorg Biochem. 2000 Aug 31;81(3):173-82. doi: 10.1016/s0162-0134(00)00101-x.
5
Role of tyrosine-103 in myoglobin peroxidase activity: kinetic and steady-state studies on the reaction of wild-type and variant recombinant human myoglobins with H(2)O(2).酪氨酸-103在肌红蛋白过氧化物酶活性中的作用:野生型和变异型重组人肌红蛋白与H₂O₂反应的动力学和稳态研究
Biochemistry. 2002 Sep 24;41(38):11495-503. doi: 10.1021/bi025835w.
6
The role of distal histidine in peroxidase activity of myoglobin--transient-kinetics study of the reaction of H2O2 with wild-type and distal-histidine-mutanted recombinant human myoglobin.远端组氨酸在肌红蛋白过氧化物酶活性中的作用——H2O2与野生型及远端组氨酸突变型重组人肌红蛋白反应的瞬态动力学研究
Eur J Biochem. 1998 Nov 1;257(3):547-55. doi: 10.1046/j.1432-1327.1998.2570547.x.
7
YhjA - An Escherichia coli trihemic enzyme with quinol peroxidase activity.YhjA——一种具有喹诺酮过氧化物酶活性的大肠杆菌三血红素酶。
Biochim Biophys Acta Bioenerg. 2018 Jun;1859(6):411-422. doi: 10.1016/j.bbabio.2018.03.008. Epub 2018 Mar 14.
8
Amphitrite ornata dehaloperoxidase (DHP): investigations of structural factors that influence the mechanism of halophenol dehalogenation using "peroxidase-like" myoglobin mutants and "myoglobin-like" DHP mutants.华丽神仙鱼去卤过氧化物酶 (DHP):使用“过氧化物酶样”肌红蛋白突变体和“肌红蛋白样”DHP 突变体研究影响卤酚脱卤机制的结构因素的研究。
Biochemistry. 2011 Sep 27;50(38):8172-80. doi: 10.1021/bi2009129. Epub 2011 Aug 30.
9
Effect of Outer-Sphere Side Chain Substitutions on the Fate of the trans Iron-Nitrosyl Dimer in Heme/Nonheme Engineered Myoglobins (Fe(B)Mbs): Insights into the Mechanism of Denitrifying NO Reductases.外球侧链取代对血红素/非血红素工程肌红蛋白(Fe(B)Mbs)中反式亚硝酰铁二聚体命运的影响:对反硝化NO还原酶作用机制的见解
Biochemistry. 2016 Apr 12;55(14):2091-9. doi: 10.1021/acs.biochem.5b01109. Epub 2016 Mar 29.
10
Rational design of artificial dye-decolorizing peroxidases using myoglobin by engineering Tyr/Trp in the heme center.通过在血红素中心工程化 Tyr/Trp 来合理设计人工染料脱色过氧化物酶肌红蛋白。
Dalton Trans. 2017 Aug 29;46(34):11230-11238. doi: 10.1039/c7dt02302b.

引用本文的文献

1
Noncanonical Amino Acids: Bringing New-to-Nature Functionalities to Biocatalysis.非天然氨基酸:为生物催化带来全新的功能。
Chem Rev. 2024 Oct 9;124(19):10877-10923. doi: 10.1021/acs.chemrev.4c00136. Epub 2024 Sep 27.
2
Noncanonical Amino Acids in Biocatalysis.非天然氨基酸在生物催化中的应用。
Chem Rev. 2024 Jul 24;124(14):8740-8786. doi: 10.1021/acs.chemrev.4c00120. Epub 2024 Jul 3.
3
Biosynthesis and Genetic Incorporation of 3,4-Dihydroxy-L-Phenylalanine into Proteins in Escherichia coli.3,4-二羟基-L-苯丙氨酸在大肠杆菌中蛋白质的生物合成和基因掺入。
J Mol Biol. 2022 Apr 30;434(8):167412. doi: 10.1016/j.jmb.2021.167412. Epub 2021 Dec 20.
4
How to Turn an Electron Transfer Protein into a Redox Enzyme for Biosensing.如何将电子转移蛋白转化为用于生物传感的氧化还原酶。
Molecules. 2021 Aug 16;26(16):4950. doi: 10.3390/molecules26164950.

本文引用的文献

1
Ferric nitrosylated myoglobin catalyzes peroxynitrite scavenging.亚铁亚硝化肌红蛋白催化过氧亚硝酸根清除。
J Biol Inorg Chem. 2020 May;25(3):361-370. doi: 10.1007/s00775-020-01767-2. Epub 2020 Mar 14.
2
A subtle structural change in the distal haem pocket has a remarkable effect on tuning hydrogen peroxide reactivity in dye decolourising peroxidases from Streptomyces lividans.远端血红素口袋的细微结构变化对来自链霉菌的染料脱色过氧化物酶中过氧化氢反应性的调谐有显著影响。
Dalton Trans. 2020 Feb 7;49(5):1620-1636. doi: 10.1039/c9dt04583j. Epub 2020 Jan 16.
3
Myoglobin as a versatile peroxidase: Implications for a more important role for vertebrate striated muscle in antioxidant defense.肌红蛋白作为一种多功能过氧化物酶:脊椎动物横纹肌在抗氧化防御中发挥更重要作用的意义。
Comp Biochem Physiol B Biochem Mol Biol. 2019 Aug;234:9-17. doi: 10.1016/j.cbpb.2019.04.005. Epub 2019 Apr 30.
4
The Nature and Reactivity of Ferryl Heme in Compounds I and II.化合物 I 和 II 中高铁血红素的性质和反应性。
Acc Chem Res. 2018 Feb 20;51(2):427-435. doi: 10.1021/acs.accounts.7b00463. Epub 2018 Jan 12.
5
Improved rate of substrate oxidation catalyzed by genetically-engineered myoglobin.基因工程改造的肌红蛋白催化的底物氧化速率提高。
Arch Biochem Biophys. 2018 Feb 1;639:44-51. doi: 10.1016/j.abb.2017.12.014. Epub 2017 Dec 23.
6
Exploiting and engineering hemoproteins for abiological carbene and nitrene transfer reactions.利用和改造血蛋白用于非生物卡宾和氮宾转移反应。
Curr Opin Biotechnol. 2017 Oct;47:102-111. doi: 10.1016/j.copbio.2017.06.005. Epub 2017 Jul 13.
7
Glycosylation and oligomeric state of envelope protein might influence HIV-1 virion capture by α4β7 integrin.包膜蛋白的糖基化和寡聚状态可能会影响α4β7整合素对HIV-1病毒体的捕获。
Virology. 2017 Aug;508:199-212. doi: 10.1016/j.virol.2017.05.016. Epub 2017 May 31.
8
Peroxygenases en route to becoming dream catalysts. What are the opportunities and challenges?过氧酶迈向理想催化剂之路。机遇与挑战有哪些?
Curr Opin Chem Biol. 2017 Apr;37:1-9. doi: 10.1016/j.cbpa.2016.10.007. Epub 2016 Dec 16.
9
Rational Design of Dual Active Sites in a Single Protein Scaffold: A Case Study of Heme Protein in Myoglobin.单蛋白支架中双活性位点的理性设计:以肌红蛋白中的血红素蛋白为例
ChemistryOpen. 2016 Mar 8;5(3):192-196. doi: 10.1002/open.201500224. eCollection 2016 Jun.
10
Hydrogen Sulfide Oxidation by Myoglobin.肌红蛋白对硫化氢的氧化作用。
J Am Chem Soc. 2016 Jul 13;138(27):8476-88. doi: 10.1021/jacs.6b03456. Epub 2016 Jun 30.