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酸性pH对肽Polybia-MP1及其含组氨酸类似物在阴离子脂质膜中的吸附和裂解活性的影响:分子动力学和光谱学的生物物理研究

The effect of acidic pH on the adsorption and lytic activity of the peptides Polybia-MP1 and its histidine-containing analog in anionic lipid membrane: a biophysical study by molecular dynamics and spectroscopy.

作者信息

Martins Ingrid Bernardes Santana, Viegas Taisa Giordano, Dos Santos Alvares Dayane, de Souza Bibiana Monson, Palma Mário Sérgio, Ruggiero Neto João, de Araujo Alexandre Suman

机构信息

Department of Physics, IBILCE, UNESP-São Paulo State University, Cristóvão Colombo, 2265-Jardim Nazareth, São José do Rio Preto, SP, 15054-000, Brazil.

Department of Basic and Applied Biology, Institute of Biosciences, UNESP-São Paulo State University, Rio Claro, SP, Brazil.

出版信息

Amino Acids. 2021 May;53(5):753-767. doi: 10.1007/s00726-021-02982-0. Epub 2021 Apr 22.

Abstract

Antimicrobial peptides (AMPs) are part of the innate immune system of many species. AMPs are short sequences rich in charged and non-polar residues. They act on the lipid phase of the plasma membrane without requiring membrane receptors. Polybia-MP1 (MP1), extracted from a native wasp, is a broad-spectrum bactericide, an inhibitor of cancer cell proliferation being non-hemolytic and non-cytotoxic. MP1 mechanism of action and its adsorption mode is not yet completely known. Its adsorption to lipid bilayer and lytic activity is most likely dependent on the ionization state of its two acidic and three basic residues and consequently on the bulk pH. Here we investigated the effect of bulk acidic (pH 5.5) and neutral pH (7.4) solution on the adsorption, insertion, and lytic activity of MP1 and its analog H-MP1 to anionic (7POPC:3POPG) model membrane. H-MP1 is a synthetic analog of MP1 with lysines replaced by histidines. Bulk pH changes could modulate this peptide efficiency. The combination of different experimental techniques and molecular dynamics (MD) simulations showed that the adsorption, insertion, and lytic activity of H-MP1 are highly sensitive to bulk pH in opposition to MP1. The atomistic details, provided by MD simulations, showed peptides contact their N-termini to the bilayer before the insertion and then lay parallel to the bilayer. Their hydrophobic faces inserted into the acyl chain phase disturb the lipid-packing.

摘要

抗菌肽(AMPs)是许多物种先天免疫系统的一部分。抗菌肽是富含带电荷和非极性残基的短序列。它们作用于质膜的脂质相,无需膜受体。从天然黄蜂中提取的Polybia-MP1(MP1)是一种广谱杀菌剂,是一种癌细胞增殖抑制剂,无溶血和细胞毒性。MP1的作用机制及其吸附模式尚未完全清楚。它对脂质双层的吸附和裂解活性很可能取决于其两个酸性和三个碱性残基的电离状态,进而取决于整体pH值。在此,我们研究了酸性(pH 5.5)和中性pH(7.4)溶液对MP1及其类似物H-MP1在阴离子(7POPC:3POPG)模型膜上的吸附、插入和裂解活性的影响。H-MP1是MP1的合成类似物,其中赖氨酸被组氨酸取代。整体pH值的变化可以调节这种肽的效率。不同实验技术与分子动力学(MD)模拟相结合表明,与MP1相反,H-MP1的吸附、插入和裂解活性对整体pH值高度敏感。MD模拟提供的原子细节表明,肽在插入之前其N端与双层接触,然后与双层平行排列。它们插入酰基链相的疏水面扰乱了脂质堆积。

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