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通过网络建模解析 物种中 ABC 转运蛋白的成药性。

Dissecting druggability of ABC transporter proteins in species through network modeling.

机构信息

Department of Pathogenesis and Cellular Response, National Centre for Cell Science, NCCS Complex, Pune, India.

出版信息

J Biomol Struct Dyn. 2022 Nov;40(18):8365-8374. doi: 10.1080/07391102.2021.1911856. Epub 2021 Apr 23.

Abstract

(Mtb) is an infectious disease that affects nearly 9.6 million people every year. Metals are important determinants of growth and pathogenicity of mycobacterium. In the present study, we have analyzed protein-protein interaction networks belonging to the iron, sulfur and molybdenum metabolism of Mycobacterium. Our analysis has identified some of the important target proteins one among them being irtA. Iron taken up by siderophores from the host is transported to irtA through which iron enters Mycobacterium. Thus, irtA plays a major role as an iron transporter in Mycobacterium. As irtA protein structure was not solved experimentally, we have predicted 3D structure of irtA. After successful model evaluation, we have identified thiosemicarbazones as possible drug candidates for irtA. Henceforth, we have designed five analogues of thiosemicarbazones and tested for their efficacy against irtA using molecular docking, among them analogue 1 showed a very good efficacy.Communicated by Ramaswamy H. Sarma.

摘要

(Mtb)是一种传染病,每年影响近 960 万人。金属是影响分枝杆菌生长和致病性的重要决定因素。在本研究中,我们分析了属于分枝杆菌铁、硫和钼代谢的蛋白质-蛋白质相互作用网络。我们的分析确定了一些重要的靶蛋白,其中之一是 irtA。铁通过从宿主摄取的铁载体被运送到 irtA,铁通过 irtA 进入分枝杆菌。因此,irtA 在分枝杆菌中作为铁转运蛋白发挥主要作用。由于 irtA 蛋白结构尚未通过实验解决,我们预测了 irtA 的 3D 结构。成功进行模型评估后,我们确定了硫代氨基甲酸盐类化合物是 irtA 的潜在药物候选物。此后,我们设计了 irtA 的五个硫代氨基甲酸盐类似物,并通过分子对接测试了它们的疗效,其中类似物 1 表现出非常好的疗效。由 Ramaswamy H. Sarma 传达。

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