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苹果 MdLTPG 基因家族的鉴定和功能分析。

Identification and functional analysis of the MdLTPG gene family in apple.

机构信息

National Key Laboratory of Crop Biology, National Research Center for Apple Engineering and Technology, Shandong Collaborative Innovation Center of Fruit & Vegetable Quality and Efficient Production, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, 271018, Shandong, China.

State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yang ling, Shannxi, 712100, China.

出版信息

Plant Physiol Biochem. 2021 Jun;163:338-347. doi: 10.1016/j.plaphy.2021.04.015. Epub 2021 Apr 19.

Abstract

Cuticular wax is synthesized from intracellular lipids that are exported by epidermal cells, and plant lipid transfer proteins (LTPs) play an important role in this process. The glycosylphosphatidylinositol (GPI)-anchored LTPs (LTPGs) are a large subgroup within the LTP family and function in lipid transport and wax formation. Although LTPG family members have been identified in several plant species, the LTPG gene family of apple (Malus domestica) remains uncharacterized. In this paper, we identified 26 potential LTPG genes by searching apple whole-genome annotation files using "GPI-anchored" and "lipid transferase" as keywords. Twenty of the 26 putative LTPG genes were confirmed as MdLTPG family members based on their subcellular localization predictions. The MdLTPGs were divided into four classes based on phylogenetic analysis and functional domain prediction. One member of each class was analyzed for subcellular localization, and all identified members were located on the plasma membrane. Most MdLTPG genes were induced by abiotic stress treatments such as low temperature, NaCl, and ABA. Finally, the MdLTPG17 protein was shown to interact with the lysine-rich arabinogalactan protein MdAGP18 to perform its function in wax transport during plant growth and development.

摘要

表皮细胞将细胞内的脂质输出并合成角质层蜡,植物脂转移蛋白(LTP)在此过程中发挥重要作用。糖基磷脂酰肌醇(GPI)锚定的 LTP(LTPG)是 LTP 家族中的一个大亚组,其功能是在脂质转运和蜡形成中发挥作用。尽管已经在几种植物物种中鉴定出了 LTPG 家族成员,但苹果(Malus domestica)的 LTPG 基因家族仍未被描述。在本文中,我们通过使用“GPI-锚定”和“脂转移酶”作为关键词搜索苹果全基因组注释文件,鉴定出了 26 个潜在的 LTPG 基因。26 个推定的 LTPG 基因中的 20 个根据其亚细胞定位预测被确认为 MdLTPG 家族成员。根据系统发育分析和功能域预测,将 MdLTPGs 分为四个类。对每个类别的一个成员进行了亚细胞定位分析,所有鉴定出的成员都位于质膜上。大多数 MdLTPG 基因受到非生物胁迫处理(如低温、NaCl 和 ABA)的诱导。最后,MdLTPG17 蛋白被证明与富含赖氨酸的阿拉伯半乳聚糖蛋白 MdAGP18 相互作用,以在植物生长和发育过程中发挥其在蜡运输中的功能。

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