McFarlane Samantha, Manseau Micheline, Wilson Paul J
Environmental and Life Sciences Department Trent University Peterborough ON Canada.
Landscape Science and Technology Division Environment and Climate Change Canada Ottawa ON Canada.
Ecol Evol. 2021 Mar 17;11(9):4507-4519. doi: 10.1002/ece3.7345. eCollection 2021 May.
In social species, reproductive success and rates of dispersal vary among individuals resulting in spatially structured populations. Network analyses of familial relationships may provide insights on how these parameters influence population-level demographic patterns. These methods, however, have rarely been applied to genetically derived pedigree data from wild populations.Here, we use parent-offspring relationships to construct familial networks from polygamous boreal woodland caribou () in Saskatchewan, Canada, to inform recovery efforts. We collected samples from 933 individuals at 15 variable microsatellite loci along with caribou-specific primers for sex identification. Using network measures, we assess the contribution of individual caribou to the population with several centrality measures and then determine which measures are best suited to inform on the population demographic structure. We investigate the centrality of individuals from eighteen different local areas, along with the entire population.We found substantial differences in centrality of individuals in different local areas, that in turn contributed differently to the full network, highlighting the importance of analyzing networks at different scales. The full network revealed that boreal caribou in Saskatchewan form a complex, interconnected familial network, as the removal of edges with high betweenness did not result in distinct subgroups. Alpha, betweenness, and eccentricity centrality were the most informative measures to characterize the population demographic structure and for spatially identifying areas of highest fitness levels and family cohesion across the range. We found varied levels of dispersal, fitness, and cohesion in family groups. : Our results demonstrate the value of different network measures in assessing genetically derived familial networks. The spatial application of the familial networks identified individuals presenting different fitness levels, short- and long-distance dispersing ability across the range in support of population monitoring and recovery efforts.
在群居物种中,繁殖成功率和扩散率因个体而异,导致种群在空间上呈现结构化。对家族关系进行网络分析,可能有助于深入了解这些参数如何影响种群水平的人口统计学模式。然而,这些方法很少应用于来自野生种群的基因谱系数据。在此,我们利用亲子关系构建加拿大萨斯喀彻温省一夫多妻制北方林地驯鹿()的家族网络,为恢复工作提供信息。我们在15个可变微卫星位点采集了933个个体的样本,并使用驯鹿特异性引物进行性别鉴定。利用网络测度,我们通过几种中心性测度评估个体驯鹿对种群的贡献,然后确定哪些测度最适合用于了解种群人口结构。我们研究了来自18个不同局部区域以及整个种群的个体的中心性。我们发现不同局部区域个体的中心性存在显著差异,这些差异对整个网络的贡献也各不相同,这突出了在不同尺度上分析网络的重要性。整个网络显示,萨斯喀彻温省的北方林地驯鹿形成了一个复杂的、相互连接的家族网络,因为去除具有高介数的边并没有导致明显的亚群。阿尔法、介数和离心率中心性是表征种群人口结构以及在空间上识别整个范围内适合度水平最高和家族凝聚力最强区域的最具信息量的测度。我们发现家族群体中的扩散、适合度和凝聚力水平各不相同。:我们的结果证明了不同网络测度在评估基因谱系家族网络中的价值。家族网络的空间应用识别出了在整个范围内具有不同适合度水平、短距离和长距离扩散能力的个体,以支持种群监测和恢复工作。