Litvinova Maria M, Khafizov Kamil, Korchagin Vitaly I, Speranskaya Anna S, Asanov Aliy Yu, Matsvay Alina D, Kiselev Daniil A, Svetlichnaya Diana V, Nuralieva Sevda Z, Moskalev Alexey A, Filippova Tamara V
Department of Medical Genetics, Ministry of Public Health of the Russian Federation, I. M. Sechenov First Moscow State Medical University, Sechenov University, Moscow, Russia.
Moscow Health Department, The Loginov Moscow Clinical Scientific Center, Moscow, Russia.
Front Genet. 2021 May 12;12:621049. doi: 10.3389/fgene.2021.621049. eCollection 2021.
Kidney stone disease is an urgent medical and social problem. Genetic factors play an important role in the disease development. This study aims to establish an association between polymorphisms in genes coding for proteins involved in calcium metabolism and the development of calcium urolithiasis in Russian population. In this case-control study, we investigated 50 patients with calcium urolithiasis (experimental group) and 50 persons lacking signs of kidney stone disease (control group). For molecular genetic analysis we used a previously developed gene panel consisting of 33 polymorphisms in 15 genes involved in calcium metabolism: , , , , , , , , , , , , , , and High-throughput target sequencing was utilized to study the loci of interest. Odds ratios and 95% confidence intervals were used to estimate the association between each SNP and risk of urolithiasis development. Multifactor dimensionality reduction analysis was also carried out to analyze the gene-gene interaction. We found statistically significant (unadjusted -value < 0.05) associations between calcium urolithiasis and the polymorphisms in the following genes: rs1042636 (OR = 3.18 for allele A), rs1801197 (OR = 6.84 for allele A), and rs6486795 (OR = 2.25 for allele C). The maximum OR was shown for AA genotypes in loci rs1042636 () and rs1801197 () (OR = 4.71, OR = 11.8, respectively). After adjustment by Benjamini-Hochberg FDR we found only (rs1801197) was significantly associated with the risk of calcium urolithiasis development. There was no relationship between recurrent course of the disease and family history of urolithiasis in investigated patients. Thus we found a statistically significant association of polymorphism rs1801197 (gene ) with calcium urolithiasis in Russian population.
肾结石病是一个紧迫的医学和社会问题。遗传因素在该疾病的发展中起着重要作用。本研究旨在建立俄罗斯人群中参与钙代谢的蛋白质编码基因多态性与钙结石症发展之间的关联。在这项病例对照研究中,我们调查了50例钙结石症患者(实验组)和50名无肾结石病迹象的人(对照组)。对于分子遗传学分析,我们使用了先前开发的基因panel,其由参与钙代谢的15个基因中的33个多态性组成: , , , , , , , , , , , , , 和 。利用高通量靶向测序来研究感兴趣的位点。比值比和95%置信区间用于估计每个单核苷酸多态性(SNP)与结石症发展风险之间的关联。还进行了多因素降维分析以分析基因 - 基因相互作用。我们发现钙结石症与以下基因中的多态性之间存在统计学显著(未校正 - 值<0.05)关联:rs1042636(等位基因A的OR = 3.18),rs1801197(等位基因A的OR = 6.84),以及rs6486795(等位基因C的OR = 2.25)。在rs1042636( )和rs1801197( )位点,AA基因型显示出最大的OR(分别为OR = 4.71,OR = 11.8)。在通过Benjamini - Hochberg错误发现率(FDR)校正后,我们发现只有 (rs1801197)与钙结石症发展风险显著相关。在所调查的患者中,疾病的复发过程与结石症家族史之间没有关系。因此,我们发现俄罗斯人群中多态性rs1801197(基因 )与钙结石症存在统计学显著关联。