Park Kyu Tae, Park SeonJoo
Department of Life Sciences, Yeungnam University, Gyeongsan, South Korea.
Front Plant Sci. 2021 Jun 4;12:638580. doi: 10.3389/fpls.2021.638580. eCollection 2021.
is a small genus of Ranunculaceae with medicinal and horticultural value. We characterized nine complete chloroplast (cp) genomes of , which ranged from 159,549 to 161,081 bp in length and had a typical quadripartite structure with a large single-copy region (LSC; 80,270-81,249 bp), a small single-copy region (SSC; 17,029-17,838 bp), and two copies of inverted repeat (IR; 31,008-31,100 bp). The cp genomes of possess 76 protein-coding genes (PCGs), 29 tRNAs, and four rRNA genes. Comparative analyses revealed a conserved ca. 5-kb IR expansion in and other Anemoneae; moreover, multiple inversion events occurred in and its relatives. Analyses of selection pressure (/) showed that most of the PCGs are highly conserved except for and in , , and Two genes ( and ) were identified as pseudogenes in . In contrast, gene was completely lost. The phylogenetic analyses based on 76 PCGs resolved the phylogeny of and its related genera. Non-monophyly of indicates that should be reclassified as an independent genus. In addition, var. is not closely related to
是毛茛科的一个小属,具有药用和园艺价值。我们对该属的9个完整叶绿体(cp)基因组进行了特征分析,其长度在159,549至161,081 bp之间,具有典型的四分体结构,包括一个大单拷贝区域(LSC;80,270 - 81,249 bp)、一个小单拷贝区域(SSC;17,029 - 17,838 bp)和两个反向重复序列拷贝(IR;31,008 - 31,100 bp)。该属的cp基因组拥有76个蛋白质编码基因(PCG)、29个tRNA和4个rRNA基因。比较分析揭示了该属和其他银莲花属植物中约5 kb的IR保守扩张;此外,该属及其近缘种发生了多次倒位事件。选择压力(/)分析表明,除了该属中的 和 外,大多数PCG高度保守。在该属中,两个基因( 和 )被鉴定为假基因。相比之下, 基因完全丢失。基于76个PCG的系统发育分析解析了该属及其相关属的系统发育关系。该属的非单系性表明应将其重新分类为一个独立的属。此外, 变种 与 关系不密切