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3,6-二羟基吡啶甲酸及其不稳定中间体3-羟基-6-(磺酰氧基)吡啶-2-羧酸钾一水合物的合成与晶体结构

Synthesis and crystal structures of 3,6-di-hydroxy-picolinic acid and its labile inter-mediate dipotassium 3-hy-droxy-6-(sulfonato-oxy)pyridine-2-carboxyl-ate monohydrate.

作者信息

Behrman Edward J, Parkin Sean

机构信息

Department of Chemistry & Biochemistry, The Ohio State University, 484 W. 12th Avenue, Columbus, Ohio, 43210, USA.

Department of Chemistry, University of Kentucky, 505 Rose Street, Lexington, Kentucky, 40506, USA.

出版信息

Acta Crystallogr E Crystallogr Commun. 2021 May 14;77(Pt 6):623-628. doi: 10.1107/S2056989021004904. eCollection 2021 Jun 1.

Abstract

A simplified two-step synthesis of 3,6-di-hydroxy-picolinic acid (3-hy-droxy-6-oxo-1,6-di-hydro-pyridine-2-carb-oxy-lic acid), CHNO (), an inter-mediate in the metabolism of picolinic acid, is described. The crystal structure of , along with that of a labile inter-mediate, dipotassium 3-hy-droxy-6-(sulfonato-oxy)pyridine-2-carboxyl-ate monohydrate, 2K·CHNOS·HO (), is also described. Compound comprises a pyridine ring with carboxyl-ate, hydroxyl (connected by an intra-molecular O-H⋯O hydrogen bond), and sulfate groups at the 2-, 3-, and 6-positions, respectively, along with two potassium cations for charge balance and one water mol-ecule of crystallization. These components are connected into a three-dimensional network by O-H⋯O hydrogen bonds arising from the water mol-ecule, C-H⋯O inter-actions and π-π stacking of pyridine rings. In , the ring nitro-gen atom is protonated, with charge balance provided by the carboxyl-ate group (., a zwitterion). The intra-molecular O-H⋯O hydrogen bond observed in is preserved in . Crystals of have unusual space-group symmetry of type 2 in which extended planar networks of O-H⋯O and N-H⋯O hydrogen-bonded mol-ecules form sheets lying parallel to the plane, constrained to = 0.25 (and 0.75). The structure was refined as a 50:50 inversion twin. A minor disorder component was modeled by reflection of the major component across a mirror plane perpendicular to .

摘要

本文描述了一种简化的两步合成3,6 - 二羟基吡啶甲酸(3 - 羟基 - 6 - 氧代 - 1,6 - 二氢吡啶 - 2 - 羧酸)(化学式为(C_6H_5NO_4))的方法,它是吡啶甲酸代谢过程中的一种中间体。同时还描述了该化合物以及一种不稳定中间体——3 - 羟基 - 6 - (磺酰氧基)吡啶 - 2 - 羧酸钾一水合物(化学式为(2K^+\cdot C_6H_4NO_5S^-\cdot H_2O))的晶体结构。化合物(C_6H_5NO_4)包含一个吡啶环,在2 - 、3 - 和6 - 位分别带有羧酸根、羟基(通过分子内(O - H\cdots O)氢键相连)和硫酸根,还有两个钾阳离子用于电荷平衡以及一个结晶水分子。这些组分通过水分子产生的(O - H\cdots O)氢键、(C - H\cdots O)相互作用以及吡啶环的(\pi - \pi)堆积连接成三维网络。在不稳定中间体中,环氮原子被质子化,由羧酸根基团提供电荷平衡(即两性离子)。在化合物(C_6H_5NO_4)中观察到的分子内(O - H\cdots O)氢键在不稳定中间体中得以保留。不稳定中间体的晶体具有不寻常的2类空间群对称性,其中由(O - H\cdots O)和(N - H\cdots O)氢键连接的分子形成的扩展平面网络构成平行于(bc)平面的片层,限定在(a = 0.25)(和(0.75))。该结构被精修为50:50的倒反孪晶。一个较小的无序组分通过主要组分在垂直于(a)轴的镜面反射进行建模。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4f6b/8183438/b91de3b054bd/e-77-00623-fig1.jpg

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