Morikawa Takamitsu J, Nishiyama Masayoshi, Yoshizawa Keiko, Fujita Hideaki, Watanabe Tomonobu M
Laboratory for Comprehensive Bioimaging, RIKEN Center for Biosystems Dynamics Research (BDR), Kobe, Hyogo 650-0047, Japan.
Graduate School of Frontier Bioscience, Osaka University, Suita, Osaka 565-0871, Japan.
Biophys Physicobiol. 2021 May 21;18:145-158. doi: 10.2142/biophysico.bppb-v18.016. eCollection 2021.
The green fluorescent protein (GFP) derived from Pacific Ocean jellyfish is an essential tool in biology. GFP-solvent interactions can modulate the fluorescent property of GFP. We previously reported that glycine insertion is an effective mutation in the yellow variant of GFP, yellow fluorescent protein (YFP). Glycine insertion into one of the β-strands comprising the barrel structure distorts its structure, allowing water molecules to invade near the chromophore, enhancing hydrostatic pressure or solution hydrophobicity sensitivity. However, the underlying mechanism of how glycine insertion imparts environmental sensitivity to YFP has not been elucidated yet. To unveil the relationship between fluorescence and β-strand distortion, we investigated the effects of glycine insertion on the dependence of the optical properties of GFP variants named enhanced-GFP (eGFP) and its yellow (eYFP) and cyan (eCFP) variants with respect to pH, temperature, pressure, and hydrophobicity. Our results showed that the quantum yield decreased depending on the number of inserted glycines in all variants, and the dependence on pH, temperature, pressure, and hydrophobicity was altered, indicating the invasion of water molecules into the β-barrel. Peak shifts in the emission spectrum were observed in glycine-inserted eGFP, suggesting a change of the electric state in the excited chromophore. A comparative investigation of the spectral shift among variants under different conditions demonstrated that glycine insertion rearranged the hydrogen bond network between His148 and the chromophore. The present results provide important insights for further understanding the fluorescence mechanism in GFPs and suggest that glycine insertion could be a potent approach for investigating the relationship between water molecules and the intra-protein chromophore.
源自太平洋水母的绿色荧光蛋白(GFP)是生物学中的一种重要工具。GFP与溶剂的相互作用可以调节GFP的荧光特性。我们之前报道过,甘氨酸插入是绿色荧光蛋白(YFP)黄色变体中的一种有效突变。将甘氨酸插入构成桶状结构的β-链之一会扭曲其结构,使水分子能够侵入发色团附近,增强流体静压或溶液疏水性敏感性。然而,甘氨酸插入如何赋予YFP环境敏感性的潜在机制尚未阐明。为了揭示荧光与β-链扭曲之间的关系,我们研究了甘氨酸插入对名为增强型绿色荧光蛋白(eGFP)及其黄色(eYFP)和青色(eCFP)变体的光学性质在pH、温度、压力和疏水性方面的依赖性的影响。我们的结果表明,在所有变体中,量子产率随着插入甘氨酸数量的增加而降低,并且对pH、温度、压力和疏水性的依赖性发生了改变,这表明水分子侵入了β-桶。在插入甘氨酸的eGFP中观察到发射光谱的峰值位移,这表明激发态发色团的电状态发生了变化。对不同条件下变体之间光谱位移的比较研究表明,甘氨酸插入重新排列了His148与发色团之间的氢键网络。目前的结果为进一步理解GFP中的荧光机制提供了重要见解,并表明甘氨酸插入可能是研究水分子与蛋白质内发色团之间关系的一种有效方法。