Suppr超能文献

牛细小病毒 1 在牦牛中的鉴定和基因组特征分析。

Identification and genomic characterization of bovine parvovirus 1 in yaks.

机构信息

College of Animal and Veterinary Sciences, Southwest Minzu University, and Key Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Chengdu, China.

出版信息

J Vet Diagn Invest. 2021 Nov;33(6):1193-1196. doi: 10.1177/10406387211029691. Epub 2021 Jul 8.

Abstract

Bovine parvovirus 1 (BPV1) is a causative agent of respiratory, gastrointestinal, and reproductive cattle diseases. We collected 149 yak diarrhea fecal samples from 9 farms in the Qinghai-Tibet Plateau. The samples were screened for BPV1 by PCR, and 2 samples were positive for BPV1. The complete genomes of these BPV1 isolates were sequenced successfully. The sequences of these 2 variants were both 5,515 bp in length and shared 96.5-96.8% identity with 2 previously reported BPV1 genomes (GenBank DQ335247, NC_001540). Twenty-six identical amino acid mutations were found in the 2 yak variants, including 7 amino acid substitutions in receptor-binding regions of the VP2 protein, and 5 amino acid substitutions in the NS1 protein C-terminal region that functions to activate transcription. The new genome sequences contribute to better understanding of the evolution and molecular characteristics of BPV1.

摘要

牛细小病毒 1 型(BPV1)是一种引起呼吸道、胃肠道和生殖系统疾病的病原体。我们从青藏高原的 9 个农场采集了 149 份牦牛腹泻粪便样本,通过 PCR 对 BPV1 进行了筛查,发现有 2 份样本呈 BPV1 阳性。这两种 BPV1 分离株的完整基因组都成功地被测序。这两种变体的序列长度均为 5515bp,与之前报道的 2 个 BPV1 基因组(GenBank DQ335247,NC_001540)的同源性为 96.5-96.8%。在这两种牦牛变体中发现了 26 个相同的氨基酸突变,包括 VP2 蛋白受体结合区的 7 个氨基酸取代,以及 NS1 蛋白 C 末端区域的 5 个氨基酸取代,该区域的功能是激活转录。新的基因组序列有助于更好地了解 BPV1 的进化和分子特征。

相似文献

1
Identification and genomic characterization of bovine parvovirus 1 in yaks.
J Vet Diagn Invest. 2021 Nov;33(6):1193-1196. doi: 10.1177/10406387211029691. Epub 2021 Jul 8.
2
First detection of bovine coronavirus in Yak (Bos grunniens) and a bovine coronavirus genome with a recombinant HE gene.
J Gen Virol. 2019 May;100(5):793-803. doi: 10.1099/jgv.0.001254. Epub 2019 Apr 1.
4
First detection of neboviruses in yak (Bos grunniens) and identification of a novel neboviruses based on complete genome.
Vet Microbiol. 2019 Sep;236:108388. doi: 10.1016/j.vetmic.2019.108388. Epub 2019 Aug 9.
5
Isolation and Characteristics of a Novel Aichivirus D from Yak.
Microbiol Spectr. 2023 Jun 15;11(3):e0009923. doi: 10.1128/spectrum.00099-23. Epub 2023 Apr 25.
7
High prevalence and genomic characteristics of G6P[1] Bovine Rotavirus A in yak in China.
J Gen Virol. 2020 Jul;101(7):701-711. doi: 10.1099/jgv.0.001426.
8
Isolation and characterization of a new enterovirus F in yak feces in the Qinghai-Tibetan Plateau.
Arch Virol. 2017 Feb;162(2):523-527. doi: 10.1007/s00705-016-3119-x. Epub 2016 Oct 25.
9
10
Genomic characterisation of bovine papillomavirus types 1 and 2 identified in equine sarcoids in Japan.
Equine Vet J. 2021 Nov;53(6):1199-1209. doi: 10.1111/evj.13398. Epub 2021 Jan 8.

本文引用的文献

1
High prevalence and genomic characteristics of G6P[1] Bovine Rotavirus A in yak in China.
J Gen Virol. 2020 Jul;101(7):701-711. doi: 10.1099/jgv.0.001426.
3
First detection of neboviruses in yak (Bos grunniens) and identification of a novel neboviruses based on complete genome.
Vet Microbiol. 2019 Sep;236:108388. doi: 10.1016/j.vetmic.2019.108388. Epub 2019 Aug 9.
5
ICTV Virus Taxonomy Profile: Parvoviridae.
J Gen Virol. 2019 Mar;100(3):367-368. doi: 10.1099/jgv.0.001212. Epub 2019 Jan 23.
6
Structure of an enteric pathogen, bovine parvovirus.
J Virol. 2015 Mar;89(5):2603-14. doi: 10.1128/JVI.03157-14. Epub 2014 Dec 17.
8
The yak genome and adaptation to life at high altitude.
Nat Genet. 2012 Jul 1;44(8):946-9. doi: 10.1038/ng.2343.
9
Human bocavirus capsid structure: insights into the structural repertoire of the parvoviridae.
J Virol. 2010 Jun;84(12):5880-9. doi: 10.1128/JVI.02719-09. Epub 2010 Apr 7.
10

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验