LGAAP：基因组组装与注释流程
LGAAP: Genome Assembly and Annotation Pipeline.
作者信息
Almutairi Hatim, Urbaniak Michael D, Bates Michelle D, Jariyapan Narissara, Kwakye-Nuako Godwin, Thomaz-Soccol Vanete, Al-Salem Waleed S, Dillon Rod J, Bates Paul A, Gatherer Derek
机构信息
Division of Biomedical and Life Sciences, Faculty of Health and Medicine, Lancaster University, Lancaster, United Kingdom.
Ministry of Health, Riyadh, Saudi Arabia.
出版信息
Microbiol Resour Announc. 2021 Jul 22;10(29):e0043921. doi: 10.1128/MRA.00439-21.
We present the LGAAP computational pipeline, which was successfully used to assemble six genomes of the parasite subfamily to chromosome-scale completeness from a combination of long- and short-read sequencing data. LGAAP is open source, and we suggest that it may easily be ported for assembly of any genome of comparable size (∼35 Mb).
我们展示了LGAAP计算流程，该流程已成功用于从长读长和短读长测序数据的组合中将寄生虫亚科的六个基因组组装到染色体规模的完整性。LGAAP是开源的，我们认为它可以很容易地移植用于组装任何大小相当（约35 Mb）的基因组。
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