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将 novel symbiovar canariense 定义为 Mesorhizobium neociceri sp. nov. 的一个新共生体,这是一种新的 Mesorhizobium 属物种,能够在“Taburiente 火山口”国家公园(拉帕尔马岛,加那利群岛)中结瘤鹰嘴豆 Cicer canariense。

Definition of the novel symbiovar canariense within Mesorhizobium neociceri sp. nov., a new species of genus Mesorhizobium nodulating Cicer canariense in the "Caldera de Taburiente" National Park (La Palma, Canary Islands).

机构信息

Departamento de Bioquímica, Microbiología, Biología Celular y Genética, Universidad de La Laguna, Tenerife, Spain.

CICS-UBI-Health Sciences Research Centre, University of Beira Interior, Covilhã, Portugal.

出版信息

Syst Appl Microbiol. 2021 Sep;44(5):126237. doi: 10.1016/j.syapm.2021.126237. Epub 2021 Jul 22.

Abstract

Cicer canariense is a highly promiscuous wild chickpea nodulated by Mesorhizobium strains in La Palma Island located at Canary archipelago. Four of these strains, CCANP34, CCANP35, CCANP38 and CCANP95 belong to a group phylogenetically close to Mesorhizobium caraganae with 100% similarity values in the 16S rRNA gene. However, the genomes of the strains CCANP35 and M. caraganae LMG 24397 obtained in this work showed ANIb and dDDH values of 90.02% and 44.1%, respectively. These values are lower than those currently accepted for different bacterial species showing that the Canarian strains do not belong to the species M. caraganae. The Canarian strains also differ from M. caraganae in the amounts of several fatty acids and in several phenotypic traits. Based on the obtained results the Canarian strains belong to a novel species for which we propose the name Mesorhizobium neociceri sp. nov. and whose type strain is CCANP35. The results of the phylogenetic analyses of nodC and nifH symbiotic genes showed that the Canarian strains represent a novel symbiovar within genus Mesorhizobium phylogenetically divergent to that encompassing M. caraganae. We propose the names canariense and caraganae for the symbiovars encompassing the strains of M. neociceri and M. caraganae, respectively.

摘要

加那利雀稗是一种高度混杂的野生鹰嘴豆,由加那利群岛拉帕尔马岛上的中慢生根瘤菌菌株进行结瘤。这四个菌株,CCANP34、CCANP35、CCANP38 和 CCANP95,属于与中慢生根瘤菌亲缘关系密切的一个组,16S rRNA 基因的相似度值为 100%。然而,在这项工作中获得的菌株 CCANP35 和 M. caraganae LMG 24397 的基因组显示 ANIb 和 dDDH 值分别为 90.02%和 44.1%。这些值低于目前不同细菌种属接受的值,表明加那利群岛的菌株不属于 M. caraganae 种。这些加那利群岛的菌株在脂肪酸含量和几种表型特征上也与 M. caraganae 菌株不同。基于获得的结果,这些加那利群岛的菌株属于一个新种,我们提议将其命名为 Mesorhizobium neociceri sp. nov.,其模式菌株为 CCANP35。共生基因 nodC 和 nifH 的系统发育分析结果表明,这些加那利群岛的菌株代表了中慢生根瘤菌属中一个与包含 M. caraganae 的进化枝不同的新共生群。我们提议将包含 M. neociceri 和 M. caraganae 菌株的共生群分别命名为 canariense 和 caraganae。

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