Suppr超能文献

用于酵母和鸡肝H3蛋白酶的组蛋白H3切割分析

Histone H3 Cleavage Assay for Yeast and Chicken Liver H3 Protease.

作者信息

Chauhan Sakshi, Azad Gajendra Kumar, Tomar Raghuvir Singh

机构信息

Laboratory of Chromatin Biology, Department of Biological Sciences, Indian Institute of Science Education and Research, Bhopal, India.

Department of Genetics, Institute of Life Sciences, Hebrew University of Jerusalem, Jerusalem, Israel.

出版信息

Bio Protoc. 2017 Jan 5;7(1):e2085. doi: 10.21769/BioProtoc.2085.

Abstract

Histone proteins are subjected to a wide array of reversible and irreversible post-translational modifications (PTMs) (Bannister and Kouzarides, 2011; Azad and Tomar, 2014). The PTMs on histones are known to regulate chromatin structure and function. Histones are irreversibly modified by proteolytic clipping of their tail domains. The proteolytic clipping of histone tails is continuously attracting interest of researchers in the field of chromatin biology. We can recapitulate H3-clipping by performing H3 cleavage assay. Here, we are presenting the detailed protocol to perform H3 cleavage assay.

摘要

组蛋白会经历一系列广泛的可逆和不可逆的翻译后修饰(PTMs)(班尼斯特和库扎里德斯,2011年;阿扎德和托马尔,2014年)。已知组蛋白上的PTMs可调节染色质的结构和功能。组蛋白通过其尾部结构域的蛋白水解剪切而发生不可逆修饰。组蛋白尾部的蛋白水解剪切一直吸引着染色质生物学领域研究人员的关注。我们可以通过进行H3剪切试验来重现H3剪切过程。在此,我们展示进行H3剪切试验的详细方案。

相似文献

1
Histone H3 Cleavage Assay for Yeast and Chicken Liver H3 Protease.
Bio Protoc. 2017 Jan 5;7(1):e2085. doi: 10.21769/BioProtoc.2085.
2
Unexpected histone H3 tail-clipping activity of glutamate dehydrogenase.
J Biol Chem. 2013 Jun 28;288(26):18743-57. doi: 10.1074/jbc.M113.462531. Epub 2013 May 14.
3
Biochemical Analysis Reveals the Multifactorial Mechanism of Histone H3 Clipping by Chicken Liver Histone H3 Protease.
Biochemistry. 2016 Sep 27;55(38):5464-82. doi: 10.1021/acs.biochem.6b00625. Epub 2016 Sep 12.
4
5
6
The micronuclear histone H3 clipping in the unicellular eukaryote .
Mar Life Sci Technol. 2022 Nov 24;4(4):584-594. doi: 10.1007/s42995-022-00151-0. eCollection 2022 Nov.
7
Intestinal differentiation involves cleavage of histone H3 N-terminal tails by multiple proteases.
Nucleic Acids Res. 2021 Jan 25;49(2):791-804. doi: 10.1093/nar/gkaa1228.
8
Modifying Chromatin by Histone Tail Clipping.
J Mol Biol. 2018 Sep 14;430(18 Pt B):3051-3067. doi: 10.1016/j.jmb.2018.07.013. Epub 2018 Jul 25.
9
Chicken liver glutamate dehydrogenase (GDH) demonstrates a histone H3 specific protease (H3ase) activity in vitro.
Biochimie. 2013 Nov;95(11):1999-2009. doi: 10.1016/j.biochi.2013.07.005. Epub 2013 Jul 13.
10
Identification of novel post-translational modifications in linker histones from chicken erythrocytes.
J Proteomics. 2015 Jan 15;113:162-77. doi: 10.1016/j.jprot.2014.10.004. Epub 2014 Oct 14.

本文引用的文献

1
Biochemical Analysis Reveals the Multifactorial Mechanism of Histone H3 Clipping by Chicken Liver Histone H3 Protease.
Biochemistry. 2016 Sep 27;55(38):5464-82. doi: 10.1021/acs.biochem.6b00625. Epub 2016 Sep 12.
2
3
Efficient expression and purification of biologically active human cystatin proteins.
Protein Expr Purif. 2016 Feb;118:10-7. doi: 10.1016/j.pep.2015.10.005. Epub 2015 Oct 19.
4
H3 clipping activity of glutamate dehydrogenase is regulated by stefin B and chromatin structure.
FEBS J. 2014 Dec;281(23):5292-308. doi: 10.1111/febs.13069. Epub 2014 Oct 27.
6
Unexpected histone H3 tail-clipping activity of glutamate dehydrogenase.
J Biol Chem. 2013 Jun 28;288(26):18743-57. doi: 10.1074/jbc.M113.462531. Epub 2013 May 14.
7
Identification of a novel histone H3 specific protease activity in nuclei of chicken liver.
Biochem Biophys Res Commun. 2012 May 4;421(2):261-7. doi: 10.1016/j.bbrc.2012.03.149. Epub 2012 Apr 6.
8
Regulation of chromatin by histone modifications.
Cell Res. 2011 Mar;21(3):381-95. doi: 10.1038/cr.2011.22. Epub 2011 Feb 15.
9
The DNA-binding activity of protein disulfide isomerase ERp57 is associated with the a(') domain.
Biochem Biophys Res Commun. 2002 Jul 5;295(1):67-73. doi: 10.1016/s0006-291x(02)00634-4.
10

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验