Department of Molecular and Cellular Biology, Harvard University, Cambridge, Massachusetts, USA.
Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California, USA.
J Bacteriol. 2022 Jan 18;204(1):e0034721. doi: 10.1128/JB.00347-21. Epub 2021 Oct 18.
Cells can use self recognition to achieve cooperative behaviors. Self-recognition genes are thought to principally evolve in tandem with partner self-recognition alleles. However, other constraints on protein evolution could exist. Here, we have identified an interaction outside self-recognition loci that could constrain the sequence variation of a self-recognition protein. We show that during collective swarm expansion in Proteus mirabilis, self-recognition signaling co-opts SdaC, a serine transporter. Serine uptake is crucial for bacterial survival and colonization. Single-residue variants of SdaC reveal that self recognition requires an open conformation of the protein; serine transport is dispensable. A distant ortholog from Escherichia coli is sufficient for self recognition; however, a paralogous serine transporter, YhaO, is not. Thus, SdaC couples self recognition and serine transport, likely through a shared molecular interface. Self-recognition proteins may follow the framework of a complex interaction network rather than an isolated two-protein system. Understanding the molecular and ecological constraints on self-recognition proteins lays the groundwork for insights into the evolution of self recognition and emergent collective behaviors. Bacteria can receive secret messages from kin during migration. For Proteus mirabilis, these messages are necessary for virulence in multispecies infections. We show that a serine transporter, conserved among gammaproteobacteria, enables self-recognition. Molecular co-option of nutrient uptake could limit the sequence variation of these message proteins. SdaC is the primary transporter for l-serine, a vital metabolite for colonization during disease. Unlike many self-recognition receptors, SdaC is sufficiently conserved between species to achieve recognition. The predicted open conformation is shared by transport and recognition. SdaC reveals the interdependence of communication and nutrient acquisition. As the broader interactions of self-recognition proteins are studied, features shared among microbial self-recognition systems, such as those of spp. and spp., could emerge.
细胞可以利用自我识别来实现合作行为。自我识别基因被认为主要与伴侣自我识别等位基因协同进化。然而,可能存在其他对蛋白质进化的限制。在这里,我们在自我识别基因座之外发现了一种可能限制自我识别蛋白序列变异的相互作用。我们表明,在 Proteus mirabilis 的集体群集扩展过程中,自我识别信号会劫持丝氨酸转运蛋白 SdaC。丝氨酸摄取对细菌的生存和定植至关重要。SdaC 的单残基变体表明,自我识别需要蛋白质的开放构象;丝氨酸转运是可有可无的。来自 Escherichia coli 的远源直系同源物足以进行自我识别;然而,一种平行的丝氨酸转运蛋白 YhaO 则不然。因此,SdaC 耦合自我识别和丝氨酸运输,可能通过共享分子界面。自我识别蛋白可能遵循复杂相互作用网络的框架,而不是孤立的双蛋白系统。了解自我识别蛋白的分子和生态限制为深入了解自我识别和新兴集体行为的进化奠定了基础。 细菌在迁徙过程中可以从亲缘关系中接收秘密信息。对于 Proteus mirabilis,这些信息对于多物种感染中的毒力是必要的。我们表明,一种丝氨酸转运蛋白在γ变形菌中保守,能够实现自我识别。营养摄取的分子共劫持可能会限制这些消息蛋白的序列变异。SdaC 是 L-丝氨酸的主要转运蛋白,L-丝氨酸是疾病定植过程中一种重要的代谢物。与许多自我识别受体不同,SdaC 在物种之间足够保守以实现识别。预测的开放构象在运输和识别中共享。SdaC 揭示了通讯和营养获取的相互依存关系。随着对自我识别蛋白更广泛的相互作用的研究,微生物自我识别系统之间共享的特征,如 spp. 和 spp. ,可能会出现。