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肠瘘和肛瘘上皮-间质转化的基因与蛋白表达:一项系统综述

Gene and protein expression of epithelial to mesenchymal transition for intestinal and anal fistula: a systematic review.

作者信息

Osman Nadila Haryani, Jailani Ruhi Fadzlyana, Rahman Hayati Abd, Hamid Nazefah Abdul

机构信息

Faculty of Medicine and Health Sciences, Universiti Sains Islam Malaysia, Nilai, Malaysia.

出版信息

Ann Coloproctol. 2023 Apr;39(2):106-114. doi: 10.3393/ac.2021.00584.0083. Epub 2021 Dec 3.

Abstract

PURPOSE

Intestinal fibrosis is a common complication of inflammatory bowel diseases. However, the possible involvement of epithelial-mesenchymal transition (EMT) has been scarcely investigated. This systematic review aims to search through research papers that are focusing on messenger RNA (mRNA) and protein expression profile in EMT in fistula or in intestinal fibrosis.

METHODS

Electronic exploration was performed until April 24, 2019 through PubMed, Ovid, Science Direct, and Scopus databases with the terms of "fistula" OR "intestinal fibrosis" AND "epithelial-mesenchymal transition". Two independent reviewers scrutinized the suitability of the title and abstract before examining the full text that met the inclusion criteria. For each study, the sample types that were used, methods for analysis, and genes expressed were identified. The list of genes was further analyzed using DAVID (Database for Annotation, Visualization, and Integrated Discovery) and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway.

RESULTS

There were 896 citations found; however, only 3 studies fulfilled the requirements. Among the EMT-related genes, 5 were upregulated genes at mRNA level while 6 were at protein level. However, only 2 downregulated genes were found at each mRNA and protein level. Of the 4 inflammation-related genes found, 3 genes were upregulated at mRNA level and 1 at protein level. These genes were confirmed to be involved in the development of inflammatory induced fibrosis and fistula through EMT. Results from quantitative real-time polymerase chain reaction analysis were consistent with the process of EMT, confirmed by the western blot protein analysis.

CONCLUSION

Many significant genes which are involved in the process of EMT in fistula and intestinal fibrosis have been identified. With high-end technology many more genes could be identified. These genes will be good molecular targets in the development of biomarkers for precision drug targeting in the future treatment of intestinal fibrosis and fistula.

摘要

目的

肠道纤维化是炎症性肠病的常见并发症。然而,上皮-间质转化(EMT)可能的参与情况鲜有研究。本系统评价旨在检索聚焦于瘘管或肠道纤维化中EMT的信使核糖核酸(mRNA)和蛋白质表达谱的研究论文。

方法

截至2019年4月24日,通过PubMed、Ovid、Science Direct和Scopus数据库进行电子检索,检索词为“瘘管”或“肠道纤维化”以及“上皮-间质转化”。两名独立评审员在审查符合纳入标准的全文之前,先仔细检查标题和摘要的适用性。对于每项研究,确定所使用的样本类型、分析方法和表达的基因。使用DAVID(注释、可视化和综合发现数据库)和KEGG(京都基因与基因组百科全书)通路对基因列表进行进一步分析。

结果

共找到896篇引文;然而,只有3项研究符合要求。在与EMT相关的基因中,mRNA水平有5个上调基因,蛋白质水平有6个上调基因。然而,在mRNA和蛋白质水平上仅发现2个下调基因。在找到的4个炎症相关基因中,3个基因在mRNA水平上调,1个在蛋白质水平上调。这些基因经证实通过EMT参与炎症诱导的纤维化和瘘管的发展。定量实时聚合酶链反应分析结果与EMT过程一致,蛋白质印迹分析也证实了这一点。

结论

已鉴定出许多参与瘘管和肠道纤维化中EMT过程的重要基因。借助高端技术,还能鉴定出更多基因。这些基因将成为未来肠道纤维化和瘘管精准药物靶向治疗生物标志物开发中的良好分子靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0407/10169555/466446259b78/ac-2021-00584-0083f1.jpg

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