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基于体外和计算输入数据的下一代生理基于动力学(PBK)模型预测在大鼠中的预测性能。

Predictive Performance of Next Generation Physiologically Based Kinetic (PBK) Model Predictions in Rats Based on In Vitro and In Silico Input Data.

机构信息

Wageningen Food Safety Research, Wageningen University and Research, 6700 AE Wageningen, the Netherlands.

Experimental Toxicology and Ecology, BASF SE, 67056 Ludwigshafen, Germany.

出版信息

Toxicol Sci. 2022 Feb 28;186(1):18-28. doi: 10.1093/toxsci/kfab150.

DOI:10.1093/toxsci/kfab150
PMID:34927682
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8883350/
Abstract

The goal of the present study was to assess the predictive performance of a minimal generic rat physiologically based kinetic (PBK) model based on in vitro and in silico input data to predict peak plasma concentrations (Cmax) upon single oral dosing. To this purpose, a dataset was generated of 3960 Cmax predictions for 44 compounds, applying different combinations of in vitro and in silico approaches for chemical parameterization, and comparison of the predictions to reported in vivo data. Best performance was obtained when (1) the hepatic clearance was parameterized based on in vitro measured intrinsic clearance values, (2) the method of Rodgers and Rowland for calculating partition coefficients, and (3) in silico calculated fraction unbound plasma and Papp values (the latter especially for very lipophilic compounds). Based on these input data, the median Cmax of 32 compounds could be predicted within 10-fold of the observed Cmax, with 22 out of these 32 compounds being predicted within 5-fold, and 8 compounds within 2-fold. Overestimations of more than 10-fold were observed for 12 compounds, whereas no underestimations of more than 10-fold occurred. Median Cmax predictions were frequently found to be within 10-fold of the observed Cmax when the scaled unbound hepatic intrinsic clearance (Clint,u) was either higher than 20 l/h or lower than 1 l/h. Similar findings were obtained with a test set of 5 in-house BASF compounds. Overall, this study provides relevant insights in the predictive performance of a minimal PBK model based on in vitro and in silico input data.

摘要

本研究的目的是评估基于体外和计算输入数据的最小通用大鼠生理药代动力学(PBK)模型对单次口服给药时的血浆峰浓度(Cmax)的预测性能。为此,生成了 44 种化合物的 3960 个 Cmax 预测数据集,应用了不同的体外和计算方法组合进行化学参数化,并将预测值与报告的体内数据进行比较。当(1)肝清除率基于体外测量的固有清除率值进行参数化,(2)使用 Rodgers 和 Rowland 方法计算分配系数,(3)计算的血浆未结合分数和 Papp 值(特别是对于非常亲脂性的化合物)时,获得了最佳性能。基于这些输入数据,可以预测 32 种化合物中的 32 种化合物的中位数 Cmax,其中 22 种化合物的预测值在 10 倍以内,其中 8 种化合物的预测值在 5 倍以内。对于 12 种化合物,观察到超过 10 倍的高估,而没有超过 10 倍的低估。当未结合的肝内在清除率(Clint,u)高于 20 l/h 或低于 1 l/h 时,中位数 Cmax 预测值通常在观察到的 Cmax 的 10 倍以内。在 5 种内部 BASF 化合物的测试集中也得到了类似的发现。总体而言,本研究提供了基于体外和计算输入数据的最小 PBK 模型的预测性能的相关见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0419/8883350/f71011ecec0b/kfab150f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0419/8883350/02eefdcca8ef/kfab150f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0419/8883350/52ced13061ec/kfab150f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0419/8883350/e715cd1a2b35/kfab150f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0419/8883350/f71011ecec0b/kfab150f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0419/8883350/02eefdcca8ef/kfab150f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0419/8883350/52ced13061ec/kfab150f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0419/8883350/e715cd1a2b35/kfab150f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0419/8883350/f71011ecec0b/kfab150f4.jpg